Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CJ12661_RS06460 Genome accession   NZ_CP028911
Coordinates   1271532..1272500 (+) Length   322 a.a.
NCBI ID   WP_002893972.1    Uniprot ID   A0A3H8JWJ4
Organism   Campylobacter jejuni strain NCTC 12661     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1266532..1277500
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJ12661_RS06435 (CJ12661_1268) cdsA 1267439..1268164 (-) 726 WP_044306196.1 phosphatidate cytidylyltransferase -
  CJ12661_RS06440 (CJ12661_1269) - 1268173..1268511 (-) 339 WP_002852397.1 hypothetical protein -
  CJ12661_RS06445 (CJ12661_1270) - 1268513..1269820 (-) 1308 WP_044306197.1 NFACT family protein -
  CJ12661_RS06450 (CJ12661_1271) mobA 1269882..1270457 (+) 576 WP_002855734.1 molybdenum cofactor guanylyltransferase -
  CJ12661_RS06455 (CJ12661_1272) pldA 1270454..1271443 (+) 990 WP_002855844.1 phospholipase A -
  CJ12661_RS06460 (CJ12661_1273) ceuB 1271532..1272500 (+) 969 WP_002893972.1 ABC transporter permease Machinery gene
  CJ12661_RS06465 (CJ12661_1274) ceuC 1272493..1273431 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  CJ12661_RS06470 (CJ12661_1275) ceuD 1273428..1274183 (+) 756 WP_044306198.1 ABC transporter ATP-binding protein -
  CJ12661_RS06475 (CJ12661_1276) ceuB 1274196..1275188 (+) 993 WP_044306199.1 enterochelin ABC transporter substrate-binding protein CeuB -
  CJ12661_RS06485 (CJ12661_1278) - 1275414..1275968 (-) 555 WP_044259037.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=288460 CJ12661_RS06460 WP_002893972.1 1271532..1272500(+) (ceuB) [Campylobacter jejuni strain NCTC 12661]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=288460 CJ12661_RS06460 WP_002893972.1 1271532..1272500(+) (ceuB) [Campylobacter jejuni strain NCTC 12661]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACCCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3H8JWJ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.689

100

0.997

Multiple sequence alignment