Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJ12660_RS05575 | Genome accession | NZ_CP028910 |
| Coordinates | 1052042..1052344 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NCTC 12660 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1047042..1057344
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ12660_RS05550 (CJ12660_1068) | rpsR | 1047404..1047664 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJ12660_RS05555 (CJ12660_1069) | lon | 1047725..1050100 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| CJ12660_RS05560 (CJ12660_1070) | - | 1050117..1050764 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CJ12660_RS05565 (CJ12660_1071) | fliW | 1050925..1051314 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJ12660_RS05570 (CJ12660_1072) | proC | 1051314..1052045 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJ12660_RS05575 (CJ12660_1073) | ctsT | 1052042..1052344 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJ12660_RS05580 (CJ12660_1074) | - | 1052341..1053003 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJ12660_RS05585 (CJ12660_1075) | - | 1053000..1053452 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CJ12660_RS05590 (CJ12660_1076) | hemD | 1053449..1054078 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| CJ12660_RS05595 (CJ12660_1077) | thiE | 1054056..1054688 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| CJ12660_RS05600 (CJ12660_1078) | thiD | 1054678..1055490 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJ12660_RS05605 (CJ12660_1079) | - | 1055487..1056173 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| CJ12660_RS05610 (CJ12660_1080) | - | 1056170..1056931 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=288426 CJ12660_RS05575 WP_002853046.1 1052042..1052344(+) (ctsT) [Campylobacter jejuni strain NCTC 12660]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=288426 CJ12660_RS05575 WP_002853046.1 1052042..1052344(+) (ctsT) [Campylobacter jejuni strain NCTC 12660]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |