Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | Sa5Y_RS18135 | Genome accession | NZ_CP028893 |
| Coordinates | 712942..714036 (-) | Length | 364 a.a. |
| NCBI ID | WP_094392623.1 | Uniprot ID | - |
| Organism | Vibrio cholerae strain Sa5Y | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 707942..719036
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Sa5Y_RS18110 (Sa5Y_VCA03390) | - | 708296..708694 (+) | 399 | WP_000831416.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| Sa5Y_RS18120 (Sa5Y_VCA03391) | - | 708932..709450 (+) | 519 | WP_000914961.1 | hypothetical protein | - |
| Sa5Y_RS18125 (Sa5Y_VCA03392) | - | 709694..710359 (+) | 666 | WP_000268198.1 | flagellar brake protein | - |
| Sa5Y_RS18130 (Sa5Y_VCA03393) | luxQ | 710351..712924 (-) | 2574 | WP_094392624.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | Regulator |
| Sa5Y_RS18135 (Sa5Y_VCA03394) | luxP | 712942..714036 (-) | 1095 | WP_094392623.1 | substrate-binding domain-containing protein | Regulator |
| Sa5Y_RS18140 (Sa5Y_VCA03395) | traF | 714248..715408 (-) | 1161 | WP_001025864.1 | conjugal transfer protein TraF | - |
| Sa5Y_RS18145 (Sa5Y_VCA03396) | - | 715510..715815 (-) | 306 | WP_000429067.1 | GIY-YIG nuclease family protein | - |
| Sa5Y_RS18150 (Sa5Y_VCA03397) | - | 715832..716482 (-) | 651 | WP_094392622.1 | YceH family protein | - |
| Sa5Y_RS18155 (Sa5Y_VCA03398) | - | 716524..716721 (-) | 198 | WP_001246071.1 | hypothetical protein | - |
| Sa5Y_RS18160 (Sa5Y_VCA03399) | - | 716909..717229 (+) | 321 | WP_001089529.1 | DUF496 family protein | - |
| Sa5Y_RS18170 (Sa5Y_VCA03401) | - | 717642..717893 (+) | 252 | WP_001882582.1 | YgjV family protein | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 41237.95 Da Isoelectric Point: 6.7045
>NTDB_id=288243 Sa5Y_RS18135 WP_094392623.1 712942..714036(-) (luxP) [Vibrio cholerae strain Sa5Y]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSTLTVAQKQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKAVPLVYSGDFEVVTKQDSAARIVELKARAFRYSDR
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSTLTVAQKQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKAVPLVYSGDFEVVTKQDSAARIVELKARAFRYSDR
Nucleotide
Download Length: 1095 bp
>NTDB_id=288243 Sa5Y_RS18135 WP_094392623.1 712942..714036(-) (luxP) [Vibrio cholerae strain Sa5Y]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTACGTTGACGGTGGCGCAAAAACAACCCGTTATTATTTCAGTGGTCTATCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCTGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGCGCGCAATTATT
GGCGCAATATTACCAAGCACATGCCCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGATACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACTCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGGGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGCTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCCGAA
GCGATTAAATGGGATTTGGAAGGGAAAGCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGTAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTACGTTGACGGTGGCGCAAAAACAACCCGTTATTATTTCAGTGGTCTATCCCGGACAGCAAATTTCCGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCTGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGCGCGCAATTATT
GGCGCAATATTACCAAGCACATGCCCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGATACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACTCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
GGCTTTGGGGGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGCTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCCGAA
GCGATTAAATGGGATTTGGAAGGGAAAGCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGTAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
98.901 |
100 |
0.989 |