Detailed information NTG0287965

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EIA51_RS01870
• Genome accession: NZ_CP034110
• Coordinates: 372306..373724 (+)
• Length: 472 a.a.
• NCBI ID: WP_035687996.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain FARPER-174
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 367306..378724

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EIA51_RS01850 (EIA51_01850)	-	368555..369724 (+)	1170	WP_035688001.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
EIA51_RS01855 (EIA51_01855)	pilF/pilF2	369758..370300 (+)	543	WP_017805302.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
EIA51_RS01860 (EIA51_01860)	dprA	370445..371545 (+)	1101	WP_035687998.1	DNA-processing protein DprA	Machinery gene
EIA51_RS01865 (EIA51_01865)	rsmD	371542..372150 (-)	609	WP_046097259.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EIA51_RS01870 (EIA51_01870)	pilA	372306..373724 (+)	1419	WP_035687996.1	signal recognition particle-docking protein FtsY	Machinery gene
EIA51_RS01875 (EIA51_01875)	glpQ	374283..375377 (-)	1095	WP_035687993.1	glycerophosphodiester phosphodiesterase	-
EIA51_RS01880 (EIA51_01880)	glpT	375471..376916 (-)	1446	Protein_363	glycerol-3-phosphate transporter	-

Sequence

Protein

• Length: 472 a.a.
• Molecular weight: 52137.57 Da
• Isoelectric Point: 4.2922

>NTDB_id=287965 EIA51_RS01870 WP_035687996.1 372306..373724(+) (pilA) [Avibacterium paragallinarum strain FARPER-174]
MTEKNKKGGFWSWFGLGKKKEEAVEPSLLQENAEEINVSQTEIPSEQSAVENSQGFEQETETLTQAEISSEQSAVENPQG
FEQETESLTQIDITPEQSAVEISQDFEQEEESLTQTDITPEQSAVENPQDFEQETESLTQIEITPEQSEAENPQPAEKEK
PSKGGFFSRLVKGLIRTKQNIGSGFLSLFSGKKIDDDLFEELEEQLLIADIGMPTTTKIINNLTQHASRKQLKEADLLYQ
QLKAELADIIKPVAQPLQIDSSKKPYVILMVGVNGVGKTTTIGKLARQFQMQGKSVMLAAGDTFRAAAVEQLQVWGERNH
IPVIAQNTGADSASVIYDAMQSAAARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAI
SQAKLFHEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGIGEKIEDLRPFQAEEFIEALFSKELETQ

Nucleotide

• Length: 1419 bp

>NTDB_id=287965 EIA51_RS01870 WP_035687996.1 372306..373724(+) (pilA) [Avibacterium paragallinarum strain FARPER-174]
ATGACAGAAAAAAATAAAAAAGGCGGATTTTGGTCTTGGTTTGGCTTAGGTAAAAAGAAAGAAGAAGCGGTAGAGCCTAG
TTTATTGCAAGAAAATGCGGAAGAAATCAACGTTTCACAAACAGAAATCCCCTCAGAACAAAGTGCGGTGGAAAATTCAC
AAGGTTTTGAGCAAGAAACGGAAACTCTAACGCAAGCTGAAATTTCCTCAGAGCAAAGTGCGGTAGAAAATCCGCAAGGT
TTTGAGCAAGAAACGGAAAGCCTAACGCAAATCGACATCACGCCAGAGCAAAGTGCGGTAGAAATTTCACAAGATTTTGA
GCAGGAAGAGGAAAGCCTAACGCAAACCGACATCACGCCAGAGCAAAGTGCGGTGGAAAATCCGCAAGATTTTGAGCAAG
AAACGGAAAGCCTAACGCAAATCGAAATCACACCAGAGCAAAGTGAAGCAGAAAATCCACAACCCGCAGAGAAAGAAAAA
CCAAGCAAAGGGGGCTTTTTCAGTCGCTTAGTGAAAGGGCTGATTCGCACCAAACAGAATATCGGTTCGGGCTTTTTGAG
CCTATTTTCAGGTAAGAAAATTGATGATGATCTGTTTGAAGAATTAGAAGAACAGTTGCTCATCGCCGATATTGGAATGC
CGACAACAACCAAGATTATCAATAATTTAACTCAACACGCCAGCCGCAAACAGCTAAAAGAGGCAGATTTGTTGTATCAA
CAGCTTAAAGCGGAGCTTGCAGATATTATTAAGCCTGTCGCACAGCCGCTGCAAATTGATAGCAGCAAAAAGCCTTATGT
GATTTTGATGGTGGGCGTAAATGGCGTGGGCAAAACTACCACCATTGGCAAACTTGCACGTCAATTCCAAATGCAAGGCA
AATCGGTGATGTTAGCCGCTGGGGATACTTTCCGTGCCGCCGCCGTAGAACAGCTACAAGTGTGGGGGGAACGCAATCAT
ATTCCTGTTATCGCTCAAAACACGGGGGCGGATTCTGCTTCCGTGATTTATGACGCAATGCAATCAGCCGCGGCGAGAAA
TATTGACATTTTAATCGCCGATACCGCAGGGCGTTTGCAAAATAAAAATAACTTAATGGACGAGCTGAAAAAAATCGTGC
GAGTGATGAAAAAATACGATGAAACCGCACCGCACGAAATTATGCTGACCCTTGACGCGGGTACAGGGCAAAACGCCATC
AGCCAAGCGAAATTATTCCACGAAGCCGTAGGGCTAACGGGGATTAGCTTAACGAAACTTGACGGCACGGCAAAAGGCGG
GGTGATTTTCGCCATCGCAGATCAATTTAAATTGCCGATTCGCTATATTGGTATCGGTGAAAAAATTGAAGACCTCCGCC
CATTCCAAGCGGAAGAATTTATTGAGGCTTTATTTAGTAAAGAATTGGAAACTCAATAG

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (182-246)

• SRP54-type protein, GTPase domain (SRP54) (266-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.914	88.771	0.39