Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   EHS18_RS10605 Genome accession   NZ_CP034098
Coordinates   2108640..2109110 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain 80wphwpl_v1     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2103640..2114110
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHS18_RS10585 (EHS18_10585) coaW 2103954..2104757 (+) 804 WP_000862728.1 type II pantothenate kinase -
  EHS18_RS10590 (EHS18_10590) - 2104883..2105554 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  EHS18_RS10595 (EHS18_10595) - 2105953..2107146 (-) 1194 WP_000183722.1 hypothetical protein -
  EHS18_RS10600 (EHS18_10600) - 2107146..2108330 (-) 1185 WP_001291490.1 M20 family metallopeptidase -
  EHS18_RS10605 (EHS18_10605) luxS 2108640..2109110 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  EHS18_RS10610 (EHS18_10610) - 2109262..2109612 (-) 351 WP_001024028.1 membrane protein -
  EHS18_RS10615 (EHS18_10615) - 2109626..2110927 (-) 1302 WP_001242307.1 pyrimidine-nucleoside phosphorylase -
  EHS18_RS10625 (EHS18_10625) deoC 2111207..2111869 (-) 663 WP_001083335.1 deoxyribose-phosphate aldolase -
  EHS18_RS10630 (EHS18_10630) deoD 2112184..2112894 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  EHS18_RS10635 (EHS18_10635) - 2113015..2113458 (-) 444 WP_000070866.1 Dps family protein -
  EHS18_RS10640 (EHS18_10640) - 2113658..2114071 (-) 414 WP_001123310.1 DUF393 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=287775 EHS18_RS10605 WP_000164421.1 2108640..2109110(+) (luxS) [Staphylococcus aureus strain 80wphwpl_v1]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=287775 EHS18_RS10605 WP_000164421.1 2108640..2109110(+) (luxS) [Staphylococcus aureus strain 80wphwpl_v1]
ATGACAAAAATGAATGTTGAAAGTTTTAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAGGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404