Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BCER98_RS05465 | Genome accession | NC_009674 |
| Coordinates | 1117807..1118130 (-) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus NVH 391-98 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1112807..1123130
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCER98_RS05435 (Bcer98_0997) | - | 1113148..1113355 (+) | 208 | Protein_1018 | hypothetical protein | - |
| BCER98_RS05440 (Bcer98_0998) | - | 1113513..1114784 (+) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| BCER98_RS05445 (Bcer98_0999) | sipW | 1114916..1115491 (+) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| BCER98_RS05450 (Bcer98_1000) | - | 1115537..1116127 (+) | 591 | WP_011984079.1 | TasA family protein | - |
| BCER98_RS05455 (Bcer98_1001) | - | 1116218..1116904 (+) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| BCER98_RS05460 (Bcer98_1002) | calY | 1117135..1117728 (+) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| BCER98_RS05465 (Bcer98_1003) | sinR | 1117807..1118130 (-) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| BCER98_RS05470 (Bcer98_1004) | - | 1118208..1118339 (-) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| BCER98_RS05475 (Bcer98_1005) | - | 1118701..1121088 (+) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| BCER98_RS05480 (Bcer98_1006) | - | 1121295..1122659 (+) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=28640 BCER98_RS05465 WP_011984082.1 1117807..1118130(-) (sinR) [Bacillus cytotoxicus NVH 391-98]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=28640 BCER98_RS05465 WP_011984082.1 1117807..1118130(-) (sinR) [Bacillus cytotoxicus NVH 391-98]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |