Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BCER98_RS04900 Genome accession   NC_009674
Coordinates   1005720..1005893 (+) Length   57 a.a.
NCBI ID   WP_011983978.1    Uniprot ID   A7GM66
Organism   Bacillus cytotoxicus NVH 391-98     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1000720..1010893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCER98_RS04880 (Bcer98_0885) clpC 1001055..1003655 (+) 2601 WP_011983974.1 ATP-dependent chaperone ClpB Regulator
  BCER98_RS04885 (Bcer98_0886) - 1003686..1003868 (-) 183 WP_011983975.1 YjzD family protein -
  BCER98_RS04890 (Bcer98_0887) - 1004025..1004759 (+) 735 WP_011983976.1 hydrolase -
  BCER98_RS04895 (Bcer98_0888) - 1004818..1005660 (+) 843 WP_011983977.1 NAD(P)-dependent oxidoreductase -
  BCER98_RS04900 (Bcer98_0889) comZ 1005720..1005893 (+) 174 WP_011983978.1 ComZ family protein Regulator
  BCER98_RS04905 (Bcer98_0890) - 1006084..1007016 (+) 933 WP_011983979.1 beta-ketoacyl-ACP synthase III -
  BCER98_RS04910 (Bcer98_0891) fabF 1007047..1008285 (+) 1239 WP_011983980.1 beta-ketoacyl-ACP synthase II -
  BCER98_RS04915 (Bcer98_0892) - 1008391..1009179 (+) 789 WP_011983981.1 DUF2268 domain-containing protein -
  BCER98_RS04920 (Bcer98_0893) - 1009320..1010066 (+) 747 WP_011983982.1 YjbA family protein -

Sequence

Protein


Download         Length: 57 a.a.        Molecular weight: 6553.74 Da        Isoelectric Point: 4.6653

>NTDB_id=28635 BCER98_RS04900 WP_011983978.1 1005720..1005893(+) (comZ) [Bacillus cytotoxicus NVH 391-98]
MNEKNMQFLQIAMKYLPEAKAILDDHGVALDMEKAQPVLELLMKVMNEAYELGKTEK

Nucleotide


Download         Length: 174 bp        

>NTDB_id=28635 BCER98_RS04900 WP_011983978.1 1005720..1005893(+) (comZ) [Bacillus cytotoxicus NVH 391-98]
ATGAATGAAAAAAATATGCAGTTTTTACAAATCGCAATGAAATATTTACCAGAGGCAAAAGCAATTTTAGATGATCATGG
AGTGGCACTTGATATGGAGAAAGCCCAGCCGGTATTAGAATTGTTAATGAAAGTGATGAATGAAGCATATGAACTAGGCA
AGACAGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-56)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7GM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.182

96.491

0.561

Multiple sequence alignment