Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EHF39_RS02460 Genome accession   NZ_CP033908
Coordinates   447239..448048 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   A0A0H2UTH0
Organism   Streptococcus pyogenes strain RLGH     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 442239..453048
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHF39_RS02440 (EHF39_02440) - 442681..443928 (+) 1248 WP_011528374.1 AMP-binding protein -
  EHF39_RS02445 (EHF39_02445) - 443984..445018 (+) 1035 WP_011528375.1 DUF3114 domain-containing protein -
  EHF39_RS02450 (EHF39_02450) yycF 445180..445890 (+) 711 WP_002985645.1 response regulator YycF -
  EHF39_RS02455 (EHF39_02455) vicK 445883..447235 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EHF39_RS02460 (EHF39_02460) vicX 447239..448048 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  EHF39_RS02465 (EHF39_02465) rnc 448491..449183 (+) 693 WP_002990670.1 ribonuclease III -
  EHF39_RS02470 (EHF39_02470) smc 449184..452723 (+) 3540 WP_011528376.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=285905 EHF39_RS02460 WP_002985641.1 447239..448048(+) (vicX) [Streptococcus pyogenes strain RLGH]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=285905 EHF39_RS02460 WP_002985641.1 447239..448048(+) (vicX) [Streptococcus pyogenes strain RLGH]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UTH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758