Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   EHF39_RS01135 Genome accession   NZ_CP033908
Coordinates   199821..200270 (+) Length   149 a.a.
NCBI ID   WP_002986120.1    Uniprot ID   A0A0H2UT44
Organism   Streptococcus pyogenes strain RLGH     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 194821..205270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EHF39_RS01110 (EHF39_01110) - 195415..196479 (+) 1065 Protein_164 ISAs1 family transposase -
  EHF39_RS01120 (EHF39_01120) - 196804..197475 (+) 672 WP_011017305.1 rhomboid family intramembrane serine protease -
  EHF39_RS01125 (EHF39_01125) galU 197575..198474 (-) 900 WP_002986125.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  EHF39_RS01130 (EHF39_01130) - 198507..199523 (-) 1017 WP_002986123.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  EHF39_RS01135 (EHF39_01135) rcrR 199821..200270 (+) 450 WP_002986120.1 MarR family transcriptional regulator Regulator
  EHF39_RS01140 (EHF39_01140) - 200263..201969 (+) 1707 WP_011528217.1 ABC transporter ATP-binding protein -
  EHF39_RS01145 (EHF39_01145) - 201972..203756 (+) 1785 WP_021299349.1 ABC transporter ATP-binding protein -
  EHF39_RS01150 (EHF39_01150) - 203874..204641 (+) 768 WP_011054158.1 epoxyqueuosine reductase QueH -
  EHF39_RS01155 (EHF39_01155) - 204751..205197 (+) 447 WP_011528219.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17343.25 Da        Isoelectric Point: 9.5568

>NTDB_id=285887 EHF39_RS01135 WP_002986120.1 199821..200270(+) (rcrR) [Streptococcus pyogenes strain RLGH]
MSQVIGDLRELIHQIEQISDEIAKKYDVEHLAGPQGYVLVFLAKHQNQEIFVKDIEKQLRISKSVASHLVKRMVKNGFIN
VMPSQVDKRYKQVVLAQVGRDKLPLLRECRKDIEHYFLKEITKEELLTAKKVIEQLKQNMLTYKGDNDA

Nucleotide


Download         Length: 450 bp        

>NTDB_id=285887 EHF39_RS01135 WP_002986120.1 199821..200270(+) (rcrR) [Streptococcus pyogenes strain RLGH]
ATGTCACAAGTGATAGGTGATTTACGTGAATTGATACATCAAATCGAACAAATTAGTGATGAGATTGCAAAAAAATATGA
TGTAGAGCATCTAGCAGGTCCTCAAGGTTATGTTCTTGTTTTTTTAGCTAAACACCAAAATCAAGAAATATTTGTCAAAG
ATATTGAAAAACAACTTCGTATCTCAAAGTCAGTTGCTAGTCATTTAGTGAAACGTATGGTCAAAAATGGGTTTATCAAT
GTGATGCCTTCCCAAGTGGATAAGCGTTATAAGCAAGTAGTGTTAGCGCAGGTTGGTAGAGATAAATTGCCTTTGTTGCG
GGAGTGTCGTAAGGATATCGAGCACTATTTTTTAAAAGAAATTACAAAAGAAGAGTTGCTGACAGCGAAAAAAGTAATTG
AACAGCTCAAGCAAAATATGCTAACTTATAAAGGAGACAACGATGCTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UT44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

47.143

93.96

0.443