Detailed information
Bioinformatically predicted
Overview
| Name | uvrC | Type | Machinery gene |
| Locus tag | SUN_RS09845 | Genome accession | NC_009663 |
| Coordinates | 1956936..1958732 (+) | Length | 598 a.a. |
| NCBI ID | WP_012083665.1 | Uniprot ID | - |
| Organism | Sulfurovum sp. NBC37-1 | ||
| Function | integration of short DNA fragment (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1951936..1963732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SUN_RS09830 (SUN_1898) | nhaD | 1953512..1954855 (-) | 1344 | WP_012083661.1 | sodium:proton antiporter NhaD | - |
| SUN_RS09835 (SUN_1899) | nadB | 1954899..1956350 (-) | 1452 | WP_012083662.1 | L-aspartate oxidase | - |
| SUN_RS13155 (SUN_1900) | - | 1956475..1956939 (+) | 465 | WP_012083664.1 | DciA family protein | - |
| SUN_RS09845 (SUN_1901) | uvrC | 1956936..1958732 (+) | 1797 | WP_012083665.1 | excinuclease ABC subunit UvrC | Machinery gene |
| SUN_RS09850 (SUN_1902) | - | 1958860..1959276 (+) | 417 | WP_012083666.1 | PAS domain-containing protein | - |
| SUN_RS09855 (SUN_1903) | - | 1959296..1960621 (+) | 1326 | WP_012083667.1 | Hpt domain-containing protein | - |
Sequence
Protein
Download Length: 598 a.a. Molecular weight: 68647.29 Da Isoelectric Point: 9.5949
>NTDB_id=28581 SUN_RS09845 WP_012083665.1 1956936..1958732(+) (uvrC) [Sulfurovum sp. NBC37-1]
MISTVRSLPNSPGVYQYFDDKDKLLYVGKAKSLKNRIKSYWRFTPTFIPNPGQSPRIIKMLHEAVRLDYIIVESEEDALI
LENSLIKQLKPKYNILLRDDKTYPYIYIDESEAYPRFEITRKVVKGKDITYYGPFPSGGRALLDALYEVFPLVQKKSCLR
EGKACLFYQIKKCLAPCEGKVSKDAYAEIVKEAKQAITKRSILTKTLQEKMQKLAVQERFEEAAALRDSIEAISSLHISS
NIDLANQMDLDIFAILNGDERGVIVKLFMRNGKIISSAYSYFRHTHIFDCNEAYRQALLEFYTIDTPYVSKEILTAHHFE
DALQVARTLSSRFEKKISIETPQRGPKAKLAKLALQNCKELLKKKDNDTIMEQKIADLLELSTIPYRVESFDNSHMMGAA
TVGGMVVWDEGKWDKHSYRRYELHARDEYGQMKEMLTRRIADFKTQPAPDLWILDGGQANLNLALSLLKDAQINLDVIAI
AKEKLDAKAHRAKGAAKDILYTAARIIELKPNDKRLHWIQRQRDEAHRYAIAYHQNKKRKEDTQVSLLNKKGIGKATVKK
LIDYFGTFDAIESATAEEIEKVTNKKISHIIKNNNSEM
MISTVRSLPNSPGVYQYFDDKDKLLYVGKAKSLKNRIKSYWRFTPTFIPNPGQSPRIIKMLHEAVRLDYIIVESEEDALI
LENSLIKQLKPKYNILLRDDKTYPYIYIDESEAYPRFEITRKVVKGKDITYYGPFPSGGRALLDALYEVFPLVQKKSCLR
EGKACLFYQIKKCLAPCEGKVSKDAYAEIVKEAKQAITKRSILTKTLQEKMQKLAVQERFEEAAALRDSIEAISSLHISS
NIDLANQMDLDIFAILNGDERGVIVKLFMRNGKIISSAYSYFRHTHIFDCNEAYRQALLEFYTIDTPYVSKEILTAHHFE
DALQVARTLSSRFEKKISIETPQRGPKAKLAKLALQNCKELLKKKDNDTIMEQKIADLLELSTIPYRVESFDNSHMMGAA
TVGGMVVWDEGKWDKHSYRRYELHARDEYGQMKEMLTRRIADFKTQPAPDLWILDGGQANLNLALSLLKDAQINLDVIAI
AKEKLDAKAHRAKGAAKDILYTAARIIELKPNDKRLHWIQRQRDEAHRYAIAYHQNKKRKEDTQVSLLNKKGIGKATVKK
LIDYFGTFDAIESATAEEIEKVTNKKISHIIKNNNSEM
Nucleotide
Download Length: 1797 bp
>NTDB_id=28581 SUN_RS09845 WP_012083665.1 1956936..1958732(+) (uvrC) [Sulfurovum sp. NBC37-1]
ATGATATCCACGGTTAGATCACTGCCGAATTCCCCCGGTGTCTATCAGTATTTTGACGACAAGGATAAGCTGCTCTATGT
CGGAAAAGCCAAAAGCCTCAAGAACCGCATTAAGAGCTACTGGCGTTTTACACCGACATTCATTCCAAACCCCGGCCAGA
GTCCCCGCATCATCAAAATGCTGCATGAAGCCGTACGCCTTGATTATATCATCGTAGAAAGTGAAGAGGATGCCCTGATC
CTGGAGAATTCTCTGATCAAACAGCTCAAACCCAAATACAACATCCTGCTTCGCGACGACAAAACCTATCCCTACATCTA
TATTGACGAATCAGAGGCCTATCCCCGTTTTGAAATCACCCGAAAAGTGGTCAAAGGCAAAGACATCACCTACTACGGTC
CCTTCCCAAGCGGTGGCAGAGCCCTGCTCGACGCCCTCTACGAAGTCTTTCCGCTTGTACAGAAAAAATCCTGCCTTCGG
GAGGGGAAAGCCTGCCTCTTCTACCAGATCAAAAAGTGCCTGGCTCCCTGTGAAGGCAAAGTCTCGAAGGATGCCTATGC
CGAGATCGTTAAAGAAGCAAAACAGGCGATCACCAAACGCAGTATACTTACTAAAACACTGCAGGAGAAGATGCAAAAAC
TTGCCGTACAGGAGCGCTTTGAAGAAGCTGCCGCCCTGCGCGACAGTATAGAAGCAATCTCTTCCCTGCACATCTCCTCG
AATATCGATCTTGCCAATCAGATGGATCTGGATATCTTTGCCATCCTCAACGGTGACGAACGTGGGGTCATTGTCAAGCT
CTTCATGCGCAACGGAAAGATCATCTCGAGTGCCTACAGCTACTTCAGGCATACGCATATTTTTGACTGCAACGAGGCAT
ACAGACAGGCACTGCTGGAATTTTACACCATCGACACTCCCTATGTCAGCAAAGAGATACTTACCGCACACCACTTTGAA
GATGCCCTCCAGGTCGCCCGGACGCTCAGCAGCCGTTTTGAAAAAAAGATCAGTATTGAAACACCGCAGAGAGGTCCCAA
GGCAAAACTGGCAAAACTGGCCCTCCAGAACTGTAAGGAACTCTTGAAGAAAAAAGACAATGACACGATCATGGAACAAA
AGATAGCCGATCTGCTGGAACTCTCAACCATCCCATACCGCGTTGAGAGCTTTGACAATTCCCATATGATGGGTGCCGCT
ACGGTAGGAGGAATGGTTGTATGGGATGAAGGAAAATGGGACAAACACTCCTACAGGCGCTACGAACTGCATGCACGGGA
TGAATATGGCCAGATGAAAGAGATGCTCACTCGGCGCATAGCCGACTTCAAGACACAGCCTGCTCCGGATCTATGGATAC
TCGACGGGGGACAGGCCAACCTCAATCTTGCACTCTCCCTCCTCAAAGACGCACAGATAAACCTGGATGTCATCGCCATC
GCCAAAGAAAAACTCGATGCCAAGGCCCATCGTGCCAAAGGGGCAGCCAAAGACATTCTTTACACGGCAGCCAGAATTAT
CGAACTCAAACCCAACGACAAACGCCTGCACTGGATCCAGCGACAGCGTGACGAGGCACACCGCTATGCCATTGCCTACC
ACCAGAACAAAAAGCGCAAAGAAGATACACAGGTCTCACTTCTAAACAAAAAAGGGATCGGCAAGGCAACCGTGAAGAAA
CTCATAGATTATTTCGGTACATTCGACGCGATTGAAAGTGCCACTGCGGAAGAGATAGAGAAAGTTACAAATAAGAAAAT
TTCCCATATTATCAAAAATAATAATAGTGAAATGTGA
ATGATATCCACGGTTAGATCACTGCCGAATTCCCCCGGTGTCTATCAGTATTTTGACGACAAGGATAAGCTGCTCTATGT
CGGAAAAGCCAAAAGCCTCAAGAACCGCATTAAGAGCTACTGGCGTTTTACACCGACATTCATTCCAAACCCCGGCCAGA
GTCCCCGCATCATCAAAATGCTGCATGAAGCCGTACGCCTTGATTATATCATCGTAGAAAGTGAAGAGGATGCCCTGATC
CTGGAGAATTCTCTGATCAAACAGCTCAAACCCAAATACAACATCCTGCTTCGCGACGACAAAACCTATCCCTACATCTA
TATTGACGAATCAGAGGCCTATCCCCGTTTTGAAATCACCCGAAAAGTGGTCAAAGGCAAAGACATCACCTACTACGGTC
CCTTCCCAAGCGGTGGCAGAGCCCTGCTCGACGCCCTCTACGAAGTCTTTCCGCTTGTACAGAAAAAATCCTGCCTTCGG
GAGGGGAAAGCCTGCCTCTTCTACCAGATCAAAAAGTGCCTGGCTCCCTGTGAAGGCAAAGTCTCGAAGGATGCCTATGC
CGAGATCGTTAAAGAAGCAAAACAGGCGATCACCAAACGCAGTATACTTACTAAAACACTGCAGGAGAAGATGCAAAAAC
TTGCCGTACAGGAGCGCTTTGAAGAAGCTGCCGCCCTGCGCGACAGTATAGAAGCAATCTCTTCCCTGCACATCTCCTCG
AATATCGATCTTGCCAATCAGATGGATCTGGATATCTTTGCCATCCTCAACGGTGACGAACGTGGGGTCATTGTCAAGCT
CTTCATGCGCAACGGAAAGATCATCTCGAGTGCCTACAGCTACTTCAGGCATACGCATATTTTTGACTGCAACGAGGCAT
ACAGACAGGCACTGCTGGAATTTTACACCATCGACACTCCCTATGTCAGCAAAGAGATACTTACCGCACACCACTTTGAA
GATGCCCTCCAGGTCGCCCGGACGCTCAGCAGCCGTTTTGAAAAAAAGATCAGTATTGAAACACCGCAGAGAGGTCCCAA
GGCAAAACTGGCAAAACTGGCCCTCCAGAACTGTAAGGAACTCTTGAAGAAAAAAGACAATGACACGATCATGGAACAAA
AGATAGCCGATCTGCTGGAACTCTCAACCATCCCATACCGCGTTGAGAGCTTTGACAATTCCCATATGATGGGTGCCGCT
ACGGTAGGAGGAATGGTTGTATGGGATGAAGGAAAATGGGACAAACACTCCTACAGGCGCTACGAACTGCATGCACGGGA
TGAATATGGCCAGATGAAAGAGATGCTCACTCGGCGCATAGCCGACTTCAAGACACAGCCTGCTCCGGATCTATGGATAC
TCGACGGGGGACAGGCCAACCTCAATCTTGCACTCTCCCTCCTCAAAGACGCACAGATAAACCTGGATGTCATCGCCATC
GCCAAAGAAAAACTCGATGCCAAGGCCCATCGTGCCAAAGGGGCAGCCAAAGACATTCTTTACACGGCAGCCAGAATTAT
CGAACTCAAACCCAACGACAAACGCCTGCACTGGATCCAGCGACAGCGTGACGAGGCACACCGCTATGCCATTGCCTACC
ACCAGAACAAAAAGCGCAAAGAAGATACACAGGTCTCACTTCTAAACAAAAAAGGGATCGGCAAGGCAACCGTGAAGAAA
CTCATAGATTATTTCGGTACATTCGACGCGATTGAAAGTGCCACTGCGGAAGAGATAGAGAAAGTTACAAATAAGAAAAT
TTCCCATATTATCAAAAATAATAATAGTGAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| uvrC | Helicobacter pylori 26695 |
48.731 |
98.829 |
0.482 |