Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | DBA97_RS26870 | Genome accession | NZ_CP028584 |
| Coordinates | 5685800..5686357 (+) | Length | 185 a.a. |
| NCBI ID | WP_003125211.1 | Uniprot ID | A0A6A9K9C7 |
| Organism | Pseudomonas aeruginosa strain WCHPA075019 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5680800..5691357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBA97_RS26850 (DBA97_26840) | pilR | 5682076..5683413 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| DBA97_RS26855 (DBA97_26845) | thiO | 5683459..5684553 (-) | 1095 | WP_088376838.1 | glycine oxidase ThiO | - |
| DBA97_RS26860 (DBA97_26850) | - | 5684688..5685197 (+) | 510 | WP_033976381.1 | Tfp pilus assembly protein FimT/FimU | - |
| DBA97_RS26865 (DBA97_26855) | - | 5685303..5685809 (+) | 507 | WP_003134935.1 | Tfp pilus assembly protein FimT/FimU | - |
| DBA97_RS26870 (DBA97_26860) | pilV | 5685800..5686357 (+) | 558 | WP_003125211.1 | type 4a pilus minor pilin PilV | Machinery gene |
| DBA97_RS26875 (DBA97_26865) | pilW | 5686354..5687178 (+) | 825 | WP_033976380.1 | type 4a pilus minor pilin PilW | - |
| DBA97_RS26880 (DBA97_26870) | pilX | 5687175..5687762 (+) | 588 | WP_033972921.1 | type 4a pilus minor pilin PilX | - |
| DBA97_RS26885 (DBA97_26875) | pilY1 | 5687774..5691259 (+) | 3486 | WP_088376618.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20087.19 Da Isoelectric Point: 8.2171
>NTDB_id=285682 DBA97_RS26870 WP_003125211.1 5685800..5686357(+) (pilV) [Pseudomonas aeruginosa strain WCHPA075019]
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=285682 DBA97_RS26870 WP_003125211.1 5685800..5686357(+) (pilV) [Pseudomonas aeruginosa strain WCHPA075019]
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGTGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGTGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |