Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   DBQ26_RS03370 Genome accession   NZ_CP028574
Coordinates   426311..430816 (+) Length   1501 a.a.
NCBI ID   WP_057090005.1    Uniprot ID   A0A9X3TGA3
Organism   Acinetobacter pittii strain WCHAP005046     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 421311..435816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBQ26_RS03345 (DBQ26_03350) - 421755..422393 (-) 639 WP_057090004.1 hypothetical protein -
  DBQ26_RS03350 (DBQ26_03355) pilG 422677..423060 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  DBQ26_RS03355 (DBQ26_03360) pilH 423083..423445 (+) 363 WP_002116220.1 response regulator -
  DBQ26_RS03360 (DBQ26_03365) pilI 423506..424042 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  DBQ26_RS03365 (DBQ26_03370) pilJ 424085..426163 (+) 2079 WP_017482145.1 methyl-accepting chemotaxis protein -
  DBQ26_RS03370 (DBQ26_03375) chpA 426311..430816 (+) 4506 WP_057090005.1 hybrid sensor histidine kinase/response regulator Regulator
  DBQ26_RS03375 (DBQ26_03380) - 430816..431283 (+) 468 WP_057090006.1 hypothetical protein -
  DBQ26_RS03380 (DBQ26_03385) - 431579..431962 (+) 384 Protein_420 alpha/beta fold hydrolase -
  DBQ26_RS03385 (DBQ26_03390) - 431991..432383 (-) 393 Protein_421 transposase family protein -
  DBQ26_RS03390 (DBQ26_03395) - 432421..432825 (-) 405 WP_000669095.1 transposase family protein -
  DBQ26_RS03395 (DBQ26_03400) - 432913..433396 (+) 484 Protein_423 alpha/beta hydrolase -
  DBQ26_RS03400 (DBQ26_03405) dapE 433573..434709 (-) 1137 WP_005064372.1 succinyl-diaminopimelate desuccinylase -
  DBQ26_RS03405 (DBQ26_03410) - 434836..434979 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -

Sequence

Protein


Download         Length: 1501 a.a.        Molecular weight: 171214.60 Da        Isoelectric Point: 4.4137

>NTDB_id=285581 DBQ26_RS03370 WP_057090005.1 426311..430816(+) (chpA) [Acinetobacter pittii strain WCHAP005046]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTISTSEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLVASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTESETYVIPELNFEVLQQEAINNTALNLSELTSASEQIAESSNQLVEQTELQVLYADHNHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINAEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVESVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEFFEFENKRYPLRYLSEFVGSQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRLK
LVNEAIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=285581 DBQ26_RS03370 WP_057090005.1 426311..430816(+) (chpA) [Acinetobacter pittii strain WCHAP005046]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTTGAAGATACGCTTAATCGGGTAATCAACCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACAGGTTTAGAAACAAATGACTTAGAACCAGAATCAACAGAAGTTTTAACTATTTC
GACTTCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAATTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTAGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAACTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCCCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCTGCGGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGATGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCGAATCCTTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACGGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGGTAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAATCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGCTTCTGAGCAGATTGCTGAGT
CTAGTAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACAATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACGTTTATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCATCTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTACAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCCAAACACGGTATTGAGAAC
TCGCGTTATACGGAATTTGATCCTTTAGAGATGGATCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCGGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACAGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTCCAAAGA
ATTGTGAGGCAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTCGTTAATAATACAGAAGGCGAGTTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCGCAAC
GTGAGCAAGCGCAGAAACCAGAAACGGGACGTATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCATTAATGTCTGGTTTGATTAACGCAGAACAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGCACAGCCGATCAAGTTACTCAGATTTCAGGTC
GTGGTGTAGGACTGGATGTAGTACAAAGTGATATTAAGGCTCTAGGTGGCCATGTGAGCGTAGAGTCTGTGTACGGGCAG
GGAACGGTCTTCACAATACGTGTTCCAACTACAGTAGCGGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCTCTGGCCCAAATTGATCGAATTGTACGAGTTTCGCCTGCATCATTAGAACAATATTTTGGAAGCGCACAAG
AATTCTTTGAATTTGAAAATAAACGCTATCCATTGCGCTATTTATCTGAATTTGTTGGTAGTCAACCAATTCCGCGTTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGCCAAACTGTCGCATTATTAGTTGACCAACT
GATTGGATCACGTGCACAGATTGTAGTCAAACCAATTGGGCAGCAGTTCTCTAGTATCGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGTCAAGTTTGCTTAATTTTAGATGGTCAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGACTTAAG
CTGGTTAATGAAGCGATTTATAGACAACGAGAGTCTGATGAGCGACGTCTCATCATGATTGTGGATGACTCAGTAACTGT
ACGTAAAGTAACCTCACGTTTACTCGAGCGCCAAGGCTATGATGTTGTGACCGCTAAAGATGGTGTGGATGCTATAGAGC
AGCTAGAAAACATTAAGCCAGATCTGATGCTGCTTGATATTGAAATGCCACGCATGGATGGTTTTGAAGTTCTTAATCTT
GTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAAACATCGTGAACGAGC
ATTCTCATTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGGGGCTTGCCTAA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1217-1352)

Response regulator receiver domain (Response_reg)

(1378-1489)

Hpt domain (Hpt)

(25-107)

Hpt domain (Hpt)

(524-610)

Hpt domain (Hpt)

(728-792)

Hpt domain (Hpt)

(202-284)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1074-1210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.451

100

0.809

Multiple sequence alignment