Detailed information NTG0285378

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FORC085_RS25640
• Genome accession: NZ_CP028516
• Coordinates: 4997593..4998942 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225361.1
• Uniprot ID: -
• Organism: Bacillus cereus strain 1000305
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4992593..5003942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC085_RS25620 (FORC085_5121)	secA	4992918..4995425 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
FORC085_RS25625 (FORC085_5122)	raiA	4995700..4996242 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
FORC085_RS25630 (FORC085_5124)	cspC	4996565..4996762 (-)	198	WP_001990088.1	cold shock protein CspC	-
FORC085_RS25635 (FORC085_5125)	-	4996889..4997593 (-)	705	WP_033666421.1	ComF family protein	-
FORC085_RS25640 (FORC085_5126)	comFA	4997593..4998942 (-)	1350	WP_000225361.1	ATP-dependent helicase ComFA	Machinery gene
FORC085_RS25645 (FORC085_5128)	-	4999070..5000482 (-)	1413	WP_025710208.1	C40 family peptidase	-
FORC085_RS25650 (FORC085_5129)	-	5000637..5000951 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FORC085_RS25655 (FORC085_5130)	-	5001124..5001966 (-)	843	WP_000684725.1	DegV family protein	-
FORC085_RS25660 (FORC085_5132)	-	5002203..5002838 (+)	636	WP_000926672.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51147.06 Da
• Isoelectric Point: 10.0895

>NTDB_id=285378 FORC085_RS25640 WP_000225361.1 4997593..4998942(-) (comFA) [Bacillus cereus strain 1000305]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMHLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTKAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=285378 FORC085_RS25640 WP_000225361.1 4997593..4998942(-) (comFA) [Bacillus cereus strain 1000305]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTATTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGCACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAAAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	53.11	93.096	0.494