Detailed information NTG0285320

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: EGY29_RS12600
• Genome accession: NZ_CP033843
• Coordinates: 2657589..2658614 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain FDAARGOS_501
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2652589..2663614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGY29_RS12575 (EGY29_12535)	aroE	2652791..2653615 (-)	825	WP_003097314.1	shikimate dehydrogenase	-
EGY29_RS12580 (EGY29_12540)	hemF	2653673..2654590 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
EGY29_RS12585 (EGY29_12545)	-	2654781..2655758 (+)	978	WP_003097303.1	NADPH:quinone reductase	-
EGY29_RS12590 (EGY29_12550)	-	2655768..2656325 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
EGY29_RS12595 (EGY29_12555)	dprA	2656366..2657454 (-)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
EGY29_RS12600 (EGY29_12560)	tsaP	2657589..2658614 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
EGY29_RS12605 (EGY29_12565)	def	2658753..2659259 (+)	507	WP_003097293.1	peptide deformylase	-
EGY29_RS12610 (EGY29_12570)	fmt	2659314..2660258 (+)	945	WP_023098410.1	methionyl-tRNA formyltransferase	-
EGY29_RS12615 (EGY29_12575)	rsmB	2660255..2661559 (+)	1305	WP_014603454.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
EGY29_RS12620 (EGY29_12580)	trkA	2661586..2662959 (+)	1374	WP_003097289.1	Trk system potassium transporter TrkA	-
EGY29_RS12625 (EGY29_12585)	-	2663108..2663425 (+)	318	WP_003097288.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=285320 EGY29_RS12600 WP_003097294.1 2657589..2658614(-) (tsaP) [Pseudomonas aeruginosa strain FDAARGOS_501]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=285320 EGY29_RS12600 WP_003097294.1 2657589..2658614(-) (tsaP) [Pseudomonas aeruginosa strain FDAARGOS_501]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393