Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EGY27_RS24280 Genome accession   NZ_CP033835
Coordinates   4904618..4905232 (+) Length   204 a.a.
NCBI ID   WP_003153140.1    Uniprot ID   A0A2R3IUL5
Organism   Pseudomonas aeruginosa strain FDAARGOS_570     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4899618..4910232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGY27_RS24260 (EGY27_24145) - 4901072..4901701 (+) 630 WP_003153137.1 CsiV family protein -
  EGY27_RS24265 (EGY27_24150) - 4901747..4902484 (-) 738 WP_003153138.1 S-methyl-5'-thioinosine phosphorylase -
  EGY27_RS24270 (EGY27_24155) nagZ 4902495..4903493 (-) 999 WP_033977642.1 beta-N-acetylhexosaminidase -
  EGY27_RS24275 (EGY27_24160) psrA 4903685..4904386 (-) 702 WP_012075149.1 transcriptional regulator PsrA -
  EGY27_RS24280 (EGY27_24165) dinR/lexA 4904618..4905232 (+) 615 WP_003153140.1 transcriptional repressor LexA Regulator
  EGY27_RS24285 (EGY27_24170) sulA 4905244..4905741 (+) 498 WP_012075148.1 SOS-induced cell division inhibitor SulA -
  EGY27_RS24290 (EGY27_24175) - 4905765..4905998 (-) 234 WP_003153141.1 hypothetical protein -
  EGY27_RS24295 (EGY27_24180) - 4906204..4906722 (-) 519 WP_003153143.1 DUF6586 family protein -
  EGY27_RS24300 (EGY27_24185) topA 4906829..4909435 (-) 2607 WP_033977639.1 type I DNA topoisomerase -
  EGY27_RS24305 (EGY27_24190) - 4909526..4909789 (-) 264 WP_003109484.1 DUF1653 domain-containing protein -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 22521.95 Da        Isoelectric Point: 6.4989

>NTDB_id=285247 EGY27_RS24280 WP_003153140.1 4904618..4905232(+) (dinR/lexA) [Pseudomonas aeruginosa strain FDAARGOS_570]
MQKLTPRQSEILSFIKRCLEDHGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTPGASRGIRIPGFEPHAANDDE
GLPVIGRVAAGAPILAEQNIEESCRINPAFFNPRADYLLRVRGMSMKDIGILDGDLLAVHVTREARNGQVVVARLGEEVT
VKRFKREGSKVWLLAENPEFAPIEVDLKEQELIIEGLSVGVIRR

Nucleotide


Download         Length: 615 bp        

>NTDB_id=285247 EGY27_RS24280 WP_003153140.1 4904618..4905232(+) (dinR/lexA) [Pseudomonas aeruginosa strain FDAARGOS_570]
ATGCAGAAGCTGACGCCCCGCCAATCCGAGATCCTCTCCTTCATCAAGCGCTGCCTGGAAGACCACGGCTTTCCGCCGAC
CCGCGCGGAAATCGCCCAGGAACTCGGCTTCAAGTCGCCGAACGCCGCCGAGGAGCACCTCAAGGCGCTGGCGCGCAAGG
GCGCCATCGAGATGACCCCGGGCGCTTCCCGTGGCATTCGCATCCCCGGCTTCGAACCGCACGCGGCGAACGACGACGAA
GGCCTGCCGGTGATCGGCCGGGTCGCCGCCGGCGCACCGATTCTCGCCGAACAGAACATCGAGGAATCCTGCCGGATCAA
TCCCGCCTTCTTCAATCCTCGCGCCGACTACCTGTTGCGCGTGCGCGGCATGAGCATGAAGGACATCGGCATCCTCGACG
GCGACCTGCTGGCCGTCCACGTCACCCGCGAAGCGCGCAATGGCCAGGTGGTGGTCGCGCGGCTCGGCGAGGAGGTCACG
GTGAAACGCTTCAAGCGCGAAGGCAGCAAGGTCTGGCTGCTGGCGGAAAACCCCGAGTTCGCTCCGATCGAAGTCGATCT
GAAGGAGCAGGAACTGATCATCGAAGGCTTGAGCGTCGGCGTGATCCGGCGCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(83-196)

LexA DNA binding domain (LexA_DNA_bind)

(1-65)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2R3IUL5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

38.35

100

0.387