Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   C5Y81_RS09515 Genome accession   NZ_CP028470
Coordinates   1894439..1895482 (-) Length   347 a.a.
NCBI ID   WP_110164955.1    Uniprot ID   A0A1L6C0B3
Organism   Staphylococcus aureus strain IT4-R     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1889439..1900482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Y81_RS09485 (C5Y81_09485) - 1889860..1891116 (-) 1257 WP_075583716.1 aminopeptidase -
  C5Y81_RS09490 (C5Y81_09490) - 1891119..1891319 (-) 201 WP_000180460.1 DUF1128 family protein -
  C5Y81_RS09495 (C5Y81_09495) - 1891466..1891930 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  C5Y81_RS09500 (C5Y81_09500) - 1891937..1892212 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  C5Y81_RS09505 (C5Y81_09505) - 1892490..1893707 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  C5Y81_RS09510 (C5Y81_09510) vraR 1893820..1894449 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  C5Y81_RS09515 (C5Y81_09515) vraS 1894439..1895482 (-) 1044 WP_110164955.1 sensor histidine kinase Regulator
  C5Y81_RS09520 (C5Y81_09520) liaF 1895479..1896180 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  C5Y81_RS09525 (C5Y81_09525) - 1896195..1896581 (-) 387 WP_001110179.1 hypothetical protein -
  C5Y81_RS09530 (C5Y81_09530) map 1896798..1897556 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  C5Y81_RS09535 (C5Y81_09535) - 1898085..1899071 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  C5Y81_RS09545 (C5Y81_09545) - 1899502..1899915 (-) 414 WP_001670387.1 hypothetical protein -
  C5Y81_RS09550 (C5Y81_09550) - 1899944..1900054 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40056.57 Da        Isoelectric Point: 6.0577

>NTDB_id=285215 C5Y81_RS09515 WP_110164955.1 1894439..1895482(-) (vraS) [Staphylococcus aureus strain IT4-R]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGIRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=285215 C5Y81_RS09515 WP_110164955.1 1894439..1895482(-) (vraS) [Staphylococcus aureus strain IT4-R]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTATACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L6C0B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment