Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | C5Y45_RS07525 | Genome accession | NZ_CP028468 |
| Coordinates | 1537743..1538042 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain IT1-S | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1532743..1543042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5Y45_RS07500 (C5Y45_07500) | gcvPA | 1533955..1535301 (-) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| C5Y45_RS07505 (C5Y45_07505) | gcvT | 1535321..1536412 (-) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| C5Y45_RS07510 (C5Y45_07510) | - | 1536571..1537095 (-) | 525 | WP_001015122.1 | shikimate kinase | - |
| C5Y45_RS07515 (C5Y45_07515) | - | 1537085..1537231 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| C5Y45_RS07520 (C5Y45_07520) | comGF | 1537328..1537825 (-) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| C5Y45_RS07525 (C5Y45_07525) | comGE | 1537743..1538042 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| C5Y45_RS07530 (C5Y45_07530) | comGD | 1538029..1538475 (-) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C5Y45_RS07535 (C5Y45_07535) | comGC | 1538453..1538764 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C5Y45_RS07540 (C5Y45_07540) | comGB | 1538778..1539848 (-) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C5Y45_RS07545 (C5Y45_07545) | comGA | 1539820..1540794 (-) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C5Y45_RS07550 (C5Y45_07550) | - | 1540846..1541469 (-) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| C5Y45_RS07555 (C5Y45_07555) | - | 1541466..1541795 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| C5Y45_RS07560 (C5Y45_07560) | - | 1541795..1542781 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| C5Y45_RS07565 (C5Y45_07565) | - | 1542778..1542981 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=285157 C5Y45_RS07525 WP_000844413.1 1537743..1538042(-) (comGE) [Staphylococcus aureus strain IT1-S]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=285157 C5Y45_RS07525 WP_000844413.1 1537743..1538042(-) (comGE) [Staphylococcus aureus strain IT1-S]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |