Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   EGX82_RS10035 Genome accession   NZ_CP033822
Coordinates   1909388..1909828 (+) Length   146 a.a.
NCBI ID   WP_000431168.1    Uniprot ID   R4Z9I5
Organism   Streptococcus agalactiae strain FDAARGOS_512     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1904388..1914828
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX82_RS10015 (EGX82_10015) - 1904504..1905013 (-) 510 WP_000870956.1 DUF308 domain-containing protein -
  EGX82_RS10020 (EGX82_10020) gdhA 1905181..1906530 (+) 1350 WP_000200433.1 NADP-specific glutamate dehydrogenase -
  EGX82_RS10025 (EGX82_10025) - 1906600..1907010 (+) 411 WP_000594935.1 peptide deformylase -
  EGX82_RS10030 (EGX82_10030) - 1907047..1909119 (-) 2073 WP_000726930.1 bifunctional metallophosphatase/5'-nucleotidase -
  EGX82_RS10035 (EGX82_10035) rcrR 1909388..1909828 (+) 441 WP_000431168.1 MarR family transcriptional regulator Regulator
  EGX82_RS10040 (EGX82_10040) rcrP 1909875..1911692 (+) 1818 WP_000481819.1 ABC transporter ATP-binding protein Regulator
  EGX82_RS10045 (EGX82_10045) rcrQ 1911682..1913436 (+) 1755 WP_000851083.1 ABC transporter ATP-binding protein Regulator
  EGX82_RS10050 (EGX82_10050) - 1913544..1914170 (+) 627 WP_000449636.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16968.84 Da        Isoelectric Point: 9.8384

>NTDB_id=284954 EGX82_RS10035 WP_000431168.1 1909388..1909828(+) (rcrR) [Streptococcus agalactiae strain FDAARGOS_512]
MENPLQKARILVNQLEKYLDRYAKEYDVEHLAGPQGHLVMHLYKHPDKDMSIKDAEEILHISKSVASNLVKRMEKNGFIA
IVPSKTDKRVKYLYLTHLGKQKATQFEIFLEKLHSTMLAGITKEEIRTTKKVIRTLAKNMAMEDFD

Nucleotide


Download         Length: 441 bp        

>NTDB_id=284954 EGX82_RS10035 WP_000431168.1 1909388..1909828(+) (rcrR) [Streptococcus agalactiae strain FDAARGOS_512]
ATGGAGAATCCTCTTCAAAAAGCACGAATACTTGTTAATCAACTTGAAAAGTATTTAGATCGTTATGCAAAAGAGTATGA
TGTTGAACATTTAGCGGGTCCACAAGGACACTTAGTGATGCATCTCTATAAACATCCTGACAAGGATATGTCTATAAAAG
ATGCTGAAGAAATTTTACACATCTCTAAGTCTGTAGCTTCTAATTTGGTAAAACGGATGGAAAAAAATGGATTTATTGCG
ATTGTTCCATCTAAGACAGATAAGCGTGTGAAATACCTTTATTTGACTCATCTAGGTAAACAAAAGGCTACACAATTTGA
AATTTTCTTAGAAAAATTGCACAGTACCATGTTAGCAGGTATTACTAAAGAAGAGATACGTACTACCAAAAAGGTTATTA
GAACATTAGCTAAAAATATGGCGATGGAAGATTTTGATTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 7DVS

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

42.857

95.89

0.411

Multiple sequence alignment