Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   EGX82_RS00535 Genome accession   NZ_CP033822
Coordinates   107027..107695 (-) Length   222 a.a.
NCBI ID   WP_000076874.1    Uniprot ID   X5JZS1
Organism   Streptococcus agalactiae strain FDAARGOS_512     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 102027..112695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX82_RS00515 (EGX82_00515) - 102132..102845 (+) 714 WP_006151858.1 hypothetical protein -
  EGX82_RS00520 (EGX82_00520) - 102854..104701 (+) 1848 WP_025197156.1 zinc-ribbon domain-containing protein -
  EGX82_RS00525 (EGX82_00525) xerS 104979..106049 (+) 1071 WP_000817930.1 tyrosine recombinase XerS Machinery gene
  EGX82_RS00530 (EGX82_00530) - 106092..107030 (-) 939 WP_000620981.1 sensor histidine kinase -
  EGX82_RS00535 (EGX82_00535) braR 107027..107695 (-) 669 WP_000076874.1 response regulator transcription factor Regulator
  EGX82_RS00540 (EGX82_00540) - 107805..109760 (-) 1956 WP_025197157.1 FtsX-like permease family protein -
  EGX82_RS00545 (EGX82_00545) - 109762..110514 (-) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  EGX82_RS00550 (EGX82_00550) - 110540..111502 (-) 963 WP_001253125.1 S41 family peptidase -
  EGX82_RS00555 (EGX82_00555) - 111668..112206 (+) 539 Protein_106 PASTA domain-containing protein -

Sequence


Protein


Download         Length: 222 a.a.        Molecular weight: 25403.45 Da        Isoelectric Point: 5.0693

>NTDB_id=284863 EGX82_RS00535 WP_000076874.1 107027..107695(-) (braR) [Streptococcus agalactiae strain FDAARGOS_512]
MSQEQGKIYIVEDDMTIVSLLKDHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=284863 EGX82_RS00535 WP_000076874.1 107027..107695(-) (braR) [Streptococcus agalactiae strain FDAARGOS_512]
ATGTCACAAGAGCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGATCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGGGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  PDB 5DCL
  PDB 5DCM

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464


Multiple sequence alignment