Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EGX80_RS08670 Genome accession   NZ_CP033815
Coordinates   1648878..1649354 (+) Length   158 a.a.
NCBI ID   WP_032461567.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain FDAARGOS_514     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1643878..1654354
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGX80_RS08645 (EGX80_08660) - 1643919..1644707 (+) 789 WP_002984887.1 Nif3-like dinuclear metal center hexameric protein -
  EGX80_RS08650 (EGX80_08665) - 1644747..1645853 (+) 1107 WP_011054398.1 FAD-dependent oxidoreductase -
  EGX80_RS08655 (EGX80_08670) rfbA 1645911..1646780 (+) 870 WP_010922195.1 glucose-1-phosphate thymidylyltransferase RfbA -
  EGX80_RS08660 (EGX80_08675) - 1646780..1647373 (+) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  EGX80_RS08665 (EGX80_08680) rfbB 1647617..1648657 (+) 1041 WP_002984881.1 dTDP-glucose 4,6-dehydratase -
  EGX80_RS08670 (EGX80_08685) mutX 1648878..1649354 (+) 477 WP_032461567.1 8-oxo-dGTP diphosphatase Machinery gene
  EGX80_RS08675 (EGX80_08690) - 1649412..1650593 (+) 1182 WP_002990002.1 AI-2E family transporter -
  EGX80_RS08680 (EGX80_08695) - 1650583..1651830 (+) 1248 WP_011054399.1 tetratricopeptide repeat protein -
  EGX80_RS08685 (EGX80_08700) fbp54 1651889..1653541 (-) 1653 WP_011054400.1 Rqc2 family fibronectin-binding protein Fbp54 -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18409.63 Da        Isoelectric Point: 4.2635

>NTDB_id=284848 EGX80_RS08670 WP_032461567.1 1648878..1649354(+) (mutX) [Streptococcus pyogenes strain FDAARGOS_514]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDCPFFSAKFTYDQNNQLMDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=284848 EGX80_RS08670 WP_032461567.1 1648878..1649354(+) (mutX) [Streptococcus pyogenes strain FDAARGOS_514]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACTGTCCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCATGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

100

0.703

Multiple sequence alignment