Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   SM12261_RS07255 Genome accession   NZ_CP028414
Coordinates   1434349..1434642 (-) Length   97 a.a.
NCBI ID   WP_000797746.1    Uniprot ID   A0A2N6PR83
Organism   Streptococcus mitis NCTC 12261     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1429349..1439642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SM12261_RS07245 (SM12261_1402) metF 1430605..1431471 (-) 867 WP_000089956.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  SM12261_RS07250 (SM12261_1403) metE 1431575..1433824 (-) 2250 WP_000108228.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  SM12261_RS07255 (SM12261_1404) HI0659 1434349..1434642 (-) 294 WP_000797746.1 helix-turn-helix domain-containing protein Machinery gene
  SM12261_RS07260 (SM12261_1405) - 1434632..1434997 (-) 366 WP_000556942.1 type II toxin-antitoxin system RelE/ParE family toxin -
  SM12261_RS07265 (SM12261_1406) - 1435153..1435518 (-) 366 WP_001241814.1 TIGR02328 family protein -
  SM12261_RS07270 (SM12261_1407) - 1435502..1435906 (-) 405 WP_000527884.1 YbgA family protein -
  SM12261_RS07275 (SM12261_1408) - 1435974..1436675 (-) 702 WP_000748126.1 hypothetical protein -
  SM12261_RS07280 (SM12261_1409) - 1436810..1438198 (-) 1389 WP_115262365.1 hypothetical protein -
  SM12261_RS07285 (SM12261_1410) - 1438195..1439262 (-) 1068 WP_000415506.1 hypothetical protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10765.46 Da        Isoelectric Point: 7.0172

>NTDB_id=284652 SM12261_RS07255 WP_000797746.1 1434349..1434642(-) (HI0659) [Streptococcus mitis NCTC 12261]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQRKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=284652 SM12261_RS07255 WP_000797746.1 1434349..1434642(-) (HI0659) [Streptococcus mitis NCTC 12261]
ATGAAGAATAGTGCTATTGGGAGTAACTGGAAGGATGTCAGGTCAGAACTCTTTACCAAGGAGGAAATACTTGAAAGTGA
TATGCGAGTGGCTATCATGAGTGAGTTGATTGAAGCCAGACATGAGCAAGGAATCAGCCAGAAAAAGCTAGAGGAACTCA
GTGGAGTGAGCCAGCCTGTCATAGCTAGGATGGAAACAGGAAAGACAAGTCCTCAGTTGGATACAGTCTTGAAAGTTTTA
GCCAGTTTAGGAAAGACACTAGCAGTCGTCCCACTTGAACAGAGAAAGAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N6PR83

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment