Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   C9888_RS05840 Genome accession   NZ_CP028375
Coordinates   1116838..1117494 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain W1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1111838..1122494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9888_RS05815 oppF 1112368..1113285 (+) 918 WP_014417419.1 oligopeptide ABC transporter ATP-binding protein OppF -
  C9888_RS05820 - 1113392..1114588 (+) 1197 WP_014417420.1 putative glycoside hydrolase -
  C9888_RS05825 - 1114697..1115275 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  C9888_RS05830 spx 1115454..1115849 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  C9888_RS05835 - 1115906..1116562 (-) 657 WP_014417421.1 TerC family protein -
  C9888_RS05840 mecA 1116838..1117494 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  C9888_RS05845 - 1117646..1118806 (+) 1161 WP_014417422.1 competence protein CoiA family protein -
  C9888_RS05850 pepF 1119034..1120863 (+) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  C9888_RS21550 - 1120901..1121068 (-) 168 WP_003155026.1 hypothetical protein -
  C9888_RS05855 spxH 1121355..1122257 (-) 903 WP_003155024.1 protease adaptor protein SpxH -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=284434 C9888_RS05840 WP_003155032.1 1116838..1117494(+) (mecA) [Bacillus velezensis strain W1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=284434 C9888_RS05840 WP_003155032.1 1116838..1117494(+) (mecA) [Bacillus velezensis strain W1]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCAAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895


Multiple sequence alignment