Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | EGV93_RS19440 | Genome accession | NZ_CP033686 |
| Coordinates | 4055004..4055600 (-) | Length | 198 a.a. |
| NCBI ID | WP_003111077.1 | Uniprot ID | Q02K17 |
| Organism | Pseudomonas aeruginosa strain H25883 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4050004..4060600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGV93_RS32465 | - | 4050398..4050547 (-) | 150 | Protein_3735 | hypothetical protein | - |
| EGV93_RS19420 (EGV93_19360) | - | 4050640..4052223 (+) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| EGV93_RS19425 (EGV93_19365) | - | 4052220..4053107 (+) | 888 | WP_031685965.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| EGV93_RS19430 (EGV93_19370) | - | 4053181..4053720 (+) | 540 | WP_003111079.1 | CbrC family protein | - |
| EGV93_RS19435 (EGV93_19375) | - | 4053733..4054881 (-) | 1149 | WP_003111078.1 | acyl-CoA dehydrogenase family protein | - |
| EGV93_RS19440 (EGV93_19380) | recR | 4055004..4055600 (-) | 597 | WP_003111077.1 | recombination mediator RecR | Machinery gene |
| EGV93_RS19445 (EGV93_19385) | - | 4055679..4056005 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EGV93_RS19450 (EGV93_19390) | dnaX | 4056051..4058108 (-) | 2058 | WP_058199517.1 | DNA polymerase III subunit gamma/tau | - |
| EGV93_RS19455 (EGV93_19395) | - | 4058145..4059011 (+) | 867 | WP_073657140.1 | ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21201.48 Da Isoelectric Point: 6.3332
>NTDB_id=284344 EGV93_RS19440 WP_003111077.1 4055004..4055600(-) (recR) [Pseudomonas aeruginosa strain H25883]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=284344 EGV93_RS19440 WP_003111077.1 4055004..4055600(-) (recR) [Pseudomonas aeruginosa strain H25883]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCGCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTCGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |