Detailed information NTG0284344

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: C9J74_RS17445
• Genome accession: NZ_CP028358
• Coordinates: 3718640..3720013 (+)
• Length: 457 a.a.
• NCBI ID: WP_049447478.1
• Uniprot ID: A0AA42XQJ5
• Organism: Stenotrophomonas maltophilia strain W18
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3713640..3725013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9J74_RS17430	sucD	3714495..3715370 (-)	876	WP_017356169.1	succinate--CoA ligase subunit alpha	-
C9J74_RS17435	sucC	3715391..3716560 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
C9J74_RS17440	-	3716966..3718579 (+)	1614	WP_049447477.1	ATP-binding protein	-
C9J74_RS17445	pilR	3718640..3720013 (+)	1374	WP_049447478.1	sigma-54 dependent transcriptional regulator	Regulator
C9J74_RS17450	pilB	3720119..3721846 (-)	1728	WP_107380259.1	type IV-A pilus assembly ATPase PilB	Machinery gene
C9J74_RS22620	-	3722149..3722583 (-)	435	WP_107380261.1	pilin	-
C9J74_RS17460	pilC	3722944..3724203 (+)	1260	WP_107380263.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49489.81 Da
• Isoelectric Point: 6.3584

>NTDB_id=284344 C9J74_RS17445 WP_049447478.1 3718640..3720013(+) (pilR) [Stenotrophomonas maltophilia strain W18]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNTERPVPGPAAEQGARLLGASPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFIPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELRVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRAPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=284344 C9J74_RS17445 WP_049447478.1 3718640..3720013(+) (pilR) [Stenotrophomonas maltophilia strain W18]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGATGAACGCGACATCCGCGAACTGCTGGTACTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACTGCCGCCAACCTGGCCGAAGCACGCGAGTTGCTCGCCAGCAATCCGTACGATCTCTGCATCA
CCGACATGCGGCTGCCGGACGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCACGCACGCCGGTGGCG
ATGATCACCGCGTTCGGCAGCATGGACCTGGCGGTGGAAGCACTGAAGGCCGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCTCGGTGCTGCGCGGCCTGGTCAAGCATGCGCTGGAACTCAACAACACCGAACGTCCCGTGCCCGGCCCTGCAG
CCGAACAAGGCGCACGCCTGCTGGGTGCTTCGCCGGCCATGGACGTGCTGCGCACCACCATCGGCAAGGTTGCGCGCAGC
CAGGCACCGGTCTACATCCTCGGTGAATCGGGCGTGGGCAAGGAACTGGTCGCGCGCACCATCCATGCCCAGGGCGCACG
TGCGGCCGGACCGTTCATACCGGTCAACTGCGGCGCCATTCCCGGCGAACTGATGGAGAGCGAGTTCTTCGGCCATCGCA
AGGGCAGCTTCAGCGGCGCCCATGCCGACAAGCCCGGCCTGTTCCAGGCTGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCCGAGCTGCCGTTGCAGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGAGCGGTCGGTGCGGC
CAATGAGGAGCCGGTGGACGTACGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGATGGGCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAGGGTGCCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCGGAA
CTGGCCGCCGCGGTACTGGCACGCCTGGCCCGCAGCCACGGCCGTGCTACCCCGCTGCTGGCGCCTTCGGCGCTGGAGGC
ACTGGCGCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATCCTGGAACGCGCGCTGGCCCTGGCCGAGGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAACACGCGCCGCGTGCGCCGGGCAGTGCCGCGCCCGCCGAAGCCGTG
GCCGACCTGCAGCCCGGCAGCGCCGCCCTGCCCTCGTACATCGAGCAGCTGGAGCGCAGCGCCATCCAGCGCGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCTGCGCAGCTGGGGATTACCTTCCGCGCACTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.377	99.781	0.632
pilR	Acinetobacter baumannii strain A118	48.596	100	0.492