Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C9J74_RS16635 Genome accession   NZ_CP028358
Coordinates   3563824..3564225 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain W18     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3558824..3569225
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J74_RS16620 - 3560835..3562871 (-) 2037 WP_049445437.1 methyl-accepting chemotaxis protein -
  C9J74_RS16625 - 3562913..3563443 (-) 531 WP_049445439.1 chemotaxis protein CheW -
  C9J74_RS16630 - 3563443..3563805 (-) 363 WP_005410717.1 response regulator -
  C9J74_RS16635 pilG 3563824..3564225 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  C9J74_RS16640 gshB 3564466..3565413 (+) 948 WP_049445441.1 glutathione synthase -
  C9J74_RS16645 - 3565413..3566297 (+) 885 WP_049445443.1 energy transducer TonB -
  C9J74_RS16650 tsaB 3566805..3567518 (-) 714 WP_099589862.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=284342 C9J74_RS16635 WP_005418455.1 3563824..3564225(-) (pilG) [Stenotrophomonas maltophilia strain W18]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=284342 C9J74_RS16635 WP_005418455.1 3563824..3564225(-) (pilG) [Stenotrophomonas maltophilia strain W18]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAATACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment