Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | EGV94_RS20185 | Genome accession | NZ_CP033685 |
| Coordinates | 4219607..4220203 (-) | Length | 198 a.a. |
| NCBI ID | WP_003111077.1 | Uniprot ID | Q02K17 |
| Organism | Pseudomonas aeruginosa strain H26023 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4214607..4225203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGV94_RS32450 | - | 4215002..4215121 (-) | 120 | Protein_3878 | TetR family transcriptional regulator | - |
| EGV94_RS20165 (EGV94_20105) | - | 4215243..4216826 (+) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| EGV94_RS20170 (EGV94_20110) | - | 4216823..4217710 (+) | 888 | WP_003087246.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| EGV94_RS20175 (EGV94_20115) | - | 4217784..4218323 (+) | 540 | WP_003111079.1 | CbrC family protein | - |
| EGV94_RS20180 (EGV94_20120) | - | 4218336..4219484 (-) | 1149 | WP_003111078.1 | acyl-CoA dehydrogenase family protein | - |
| EGV94_RS20185 (EGV94_20125) | recR | 4219607..4220203 (-) | 597 | WP_003111077.1 | recombination mediator RecR | Machinery gene |
| EGV94_RS20190 (EGV94_20130) | - | 4220282..4220608 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EGV94_RS20195 (EGV94_20135) | dnaX | 4220654..4222759 (-) | 2106 | WP_011666715.1 | DNA polymerase III subunit gamma/tau | - |
| EGV94_RS20200 (EGV94_20140) | - | 4222796..4223662 (+) | 867 | WP_003140216.1 | ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21201.48 Da Isoelectric Point: 6.3332
>NTDB_id=284244 EGV94_RS20185 WP_003111077.1 4219607..4220203(-) (recR) [Pseudomonas aeruginosa strain H26023]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=284244 EGV94_RS20185 WP_003111077.1 4219607..4220203(-) (recR) [Pseudomonas aeruginosa strain H26023]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |