Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | Tharo_RS02810 | Genome accession | NZ_CP028339 |
| Coordinates | 573608..574900 (+) | Length | 430 a.a. |
| NCBI ID | WP_107219919.1 | Uniprot ID | A0A2R4BJJ8 |
| Organism | Thauera aromatica K172 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 568608..579900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Tharo_RS02785 (Tharo_0558) | - | 569332..569583 (-) | 252 | WP_107219915.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| Tharo_RS02790 (Tharo_0559) | coaD | 569602..570090 (-) | 489 | WP_107219916.1 | pantetheine-phosphate adenylyltransferase | - |
| Tharo_RS02795 (Tharo_0560) | rsmD | 570087..570626 (-) | 540 | WP_107219917.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| Tharo_RS02800 (Tharo_0561) | - | 570623..572041 (-) | 1419 | WP_107219918.1 | pitrilysin family protein | - |
| Tharo_RS02805 (Tharo_0562) | - | 572073..573446 (-) | 1374 | WP_107222283.1 | pitrilysin family protein | - |
| Tharo_RS02810 (Tharo_0563) | pilA | 573608..574900 (+) | 1293 | WP_107219919.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| Tharo_RS02815 (Tharo_0564) | - | 574897..575592 (+) | 696 | WP_107219920.1 | ATP-binding cassette domain-containing protein | - |
| Tharo_RS02820 (Tharo_0565) | ftsX | 575589..576485 (+) | 897 | WP_107219921.1 | permease-like cell division protein FtsX | - |
| Tharo_RS02825 (Tharo_0566) | ahpC | 576644..577207 (+) | 564 | WP_107219922.1 | alkyl hydroperoxide reductase subunit C | - |
| Tharo_RS02830 (Tharo_0567) | ahpF | 577359..578927 (+) | 1569 | WP_107222284.1 | alkyl hydroperoxide reductase subunit F | - |
Sequence
Protein
Download Length: 430 a.a. Molecular weight: 44859.20 Da Isoelectric Point: 4.8797
>NTDB_id=284216 Tharo_RS02810 WP_107219919.1 573608..574900(+) (pilA) [Thauera aromatica K172]
MFGFLKKKFGRREDEAAPVAPPAEAQSEPPQVPAQAPEEAAAAAPARSGEPAAPGDATAAALAPAAESAPGVAATPVPAA
VEVEVETEVEAAAVAIEAVAEDAPVPPQEPVPVAKKSWAERLKAGLARTRQQIGGGLASLFGLRKIDEDLLEELESTLLM
ADCGVDATQHLIDELRRRWKRDRLETADQLQKALADGLHEIIAPLEAPLQVDGHQPFIIMIAGVNGSGKTTSIGKLAKYF
QARGKSVLLAAGDTFRAAAREQLMTWGERNNVTVVAQDGGDAAAVIFDAINAARARKIDVVLADTAGRLPTQLHLMEEIA
KVRRVIAKADPTGPHEVLLVLDANIGQNALAQVKAFDQAIGVTGLVVTKLDGTAKGGVLAAIARQCPKPLRFIGVGEGID
DLQPFAAREFVDALFEPGAAAVRNGAGGRA
MFGFLKKKFGRREDEAAPVAPPAEAQSEPPQVPAQAPEEAAAAAPARSGEPAAPGDATAAALAPAAESAPGVAATPVPAA
VEVEVETEVEAAAVAIEAVAEDAPVPPQEPVPVAKKSWAERLKAGLARTRQQIGGGLASLFGLRKIDEDLLEELESTLLM
ADCGVDATQHLIDELRRRWKRDRLETADQLQKALADGLHEIIAPLEAPLQVDGHQPFIIMIAGVNGSGKTTSIGKLAKYF
QARGKSVLLAAGDTFRAAAREQLMTWGERNNVTVVAQDGGDAAAVIFDAINAARARKIDVVLADTAGRLPTQLHLMEEIA
KVRRVIAKADPTGPHEVLLVLDANIGQNALAQVKAFDQAIGVTGLVVTKLDGTAKGGVLAAIARQCPKPLRFIGVGEGID
DLQPFAAREFVDALFEPGAAAVRNGAGGRA
Nucleotide
Download Length: 1293 bp
>NTDB_id=284216 Tharo_RS02810 WP_107219919.1 573608..574900(+) (pilA) [Thauera aromatica K172]
ATGTTTGGTTTCCTGAAAAAGAAGTTCGGCCGGCGCGAAGACGAGGCCGCGCCCGTAGCCCCGCCGGCCGAGGCGCAGAG
CGAACCGCCGCAGGTGCCTGCGCAAGCGCCTGAAGAGGCCGCCGCGGCCGCCCCGGCCCGATCCGGTGAGCCTGCTGCGC
CCGGCGACGCGACCGCCGCCGCACTTGCGCCGGCGGCCGAATCCGCCCCCGGAGTGGCGGCAACGCCCGTGCCGGCTGCG
GTGGAGGTCGAGGTGGAGACCGAAGTGGAGGCGGCGGCCGTCGCCATCGAGGCGGTCGCGGAGGATGCGCCAGTCCCCCC
CCAGGAGCCTGTGCCGGTGGCGAAAAAATCCTGGGCGGAGCGCCTCAAGGCCGGTCTCGCCCGCACCCGCCAGCAGATCG
GCGGCGGGCTGGCGAGCTTGTTCGGCCTGCGCAAGATCGACGAGGACCTCCTCGAGGAGCTCGAATCCACCCTGTTGATG
GCCGACTGCGGCGTGGATGCCACCCAGCACCTGATCGACGAACTGCGCCGGCGCTGGAAGCGCGACCGTCTGGAAACCGC
CGACCAGCTGCAGAAGGCGCTCGCCGACGGCCTGCACGAGATCATTGCGCCGCTCGAGGCGCCGCTCCAGGTCGACGGCC
ATCAGCCTTTCATCATCATGATCGCGGGCGTCAACGGTTCCGGAAAGACGACCTCGATCGGCAAGCTCGCGAAGTATTTC
CAGGCCCGCGGCAAGAGCGTGCTGCTCGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGATGACCTGGGG
CGAGCGCAACAACGTCACCGTGGTCGCGCAGGACGGCGGCGATGCGGCAGCGGTGATCTTCGACGCGATCAACGCCGCGC
GTGCGCGCAAGATCGACGTCGTCCTCGCCGACACCGCCGGGCGGCTGCCGACCCAGCTCCACCTGATGGAAGAGATCGCC
AAGGTCCGCCGGGTGATCGCCAAGGCCGACCCTACCGGACCGCACGAAGTCCTGCTCGTGCTCGACGCCAACATTGGCCA
GAACGCGCTCGCCCAGGTGAAGGCCTTCGACCAGGCGATCGGGGTCACCGGCCTGGTCGTGACCAAGCTCGACGGCACCG
CCAAGGGCGGCGTGCTGGCGGCGATTGCGCGCCAGTGCCCGAAGCCGCTGCGCTTCATCGGCGTCGGCGAGGGCATCGAC
GACCTGCAGCCGTTCGCTGCGCGCGAGTTCGTCGATGCGCTGTTCGAGCCCGGCGCCGCGGCCGTCCGGAACGGCGCGGG
CGGGCGCGCATGA
ATGTTTGGTTTCCTGAAAAAGAAGTTCGGCCGGCGCGAAGACGAGGCCGCGCCCGTAGCCCCGCCGGCCGAGGCGCAGAG
CGAACCGCCGCAGGTGCCTGCGCAAGCGCCTGAAGAGGCCGCCGCGGCCGCCCCGGCCCGATCCGGTGAGCCTGCTGCGC
CCGGCGACGCGACCGCCGCCGCACTTGCGCCGGCGGCCGAATCCGCCCCCGGAGTGGCGGCAACGCCCGTGCCGGCTGCG
GTGGAGGTCGAGGTGGAGACCGAAGTGGAGGCGGCGGCCGTCGCCATCGAGGCGGTCGCGGAGGATGCGCCAGTCCCCCC
CCAGGAGCCTGTGCCGGTGGCGAAAAAATCCTGGGCGGAGCGCCTCAAGGCCGGTCTCGCCCGCACCCGCCAGCAGATCG
GCGGCGGGCTGGCGAGCTTGTTCGGCCTGCGCAAGATCGACGAGGACCTCCTCGAGGAGCTCGAATCCACCCTGTTGATG
GCCGACTGCGGCGTGGATGCCACCCAGCACCTGATCGACGAACTGCGCCGGCGCTGGAAGCGCGACCGTCTGGAAACCGC
CGACCAGCTGCAGAAGGCGCTCGCCGACGGCCTGCACGAGATCATTGCGCCGCTCGAGGCGCCGCTCCAGGTCGACGGCC
ATCAGCCTTTCATCATCATGATCGCGGGCGTCAACGGTTCCGGAAAGACGACCTCGATCGGCAAGCTCGCGAAGTATTTC
CAGGCCCGCGGCAAGAGCGTGCTGCTCGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGATGACCTGGGG
CGAGCGCAACAACGTCACCGTGGTCGCGCAGGACGGCGGCGATGCGGCAGCGGTGATCTTCGACGCGATCAACGCCGCGC
GTGCGCGCAAGATCGACGTCGTCCTCGCCGACACCGCCGGGCGGCTGCCGACCCAGCTCCACCTGATGGAAGAGATCGCC
AAGGTCCGCCGGGTGATCGCCAAGGCCGACCCTACCGGACCGCACGAAGTCCTGCTCGTGCTCGACGCCAACATTGGCCA
GAACGCGCTCGCCCAGGTGAAGGCCTTCGACCAGGCGATCGGGGTCACCGGCCTGGTCGTGACCAAGCTCGACGGCACCG
CCAAGGGCGGCGTGCTGGCGGCGATTGCGCGCCAGTGCCCGAAGCCGCTGCGCTTCATCGGCGTCGGCGAGGGCATCGAC
GACCTGCAGCCGTTCGCTGCGCGCGAGTTCGTCGATGCGCTGTTCGAGCCCGGCGCCGCGGCCGTCCGGAACGGCGCGGG
CGGGCGCGCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.582 |
99.07 |
0.521 |