Detailed information NTG0284129

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: CEP77_RS04135
• Genome accession: NZ_CP028325
• Coordinates: 843980..845419 (+)
• Length: 479 a.a.
• NCBI ID: WP_108169400.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain FDAARGOS_298
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 838980..850419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEP77_RS04115 (CEP77_04110)	glmS	839613..841406 (-)	1794	WP_108169397.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
CEP77_RS04120 (CEP77_04115)	-	841407..841646 (-)	240	WP_000461832.1	DUF2443 domain-containing protein	-
CEP77_RS04125 (CEP77_04120)	-	841689..842231 (-)	543	WP_108169398.1	purine-nucleoside phosphorylase	-
CEP77_RS04130 (CEP77_04125)	dnaA	842384..843751 (+)	1368	WP_108169399.1	chromosomal replication initiator protein DnaA	-
CEP77_RS04135 (CEP77_04130)	comH	843980..845419 (+)	1440	WP_108169400.1	competence protein	Machinery gene
CEP77_RS04145 (CEP77_04140)	-	845599..846351 (+)	753	WP_108169401.1	exodeoxyribonuclease III	-
CEP77_RS04150 (CEP77_04145)	-	846348..846983 (-)	636	WP_108169402.1	outer membrane protein	-
CEP77_RS04155 (CEP77_04150)	-	846987..847334 (-)	348	WP_108169403.1	hypothetical protein	-
CEP77_RS04160 (CEP77_04155)	recG	847416..849287 (+)	1872	WP_108169404.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54947.77 Da
• Isoelectric Point: 6.6388

>NTDB_id=284129 CEP77_RS04135 WP_108169400.1 843980..845419(+) (comH) [Helicobacter pylori strain FDAARGOS_298]
MKKSLCLYFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KFSLETTLNPNRPTIPRNTQIVFSSKELKEPHSHQMPSLNAPMQKPQNKPHSSQQSPQNFSYPELKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTSNADISENNENNENKDNVEKQAIRDPNVKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSHAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITSNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVHFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=284129 CEP77_RS04135 WP_108169400.1 843980..845419(+) (comH) [Helicobacter pylori strain FDAARGOS_298]
ATGAAAAAATCCCTTTGTCTGTATTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTAATCGAGCTTTTAGAAGA
GATCAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAATTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAATCCCCTCAAAACTTTTCCTACCCAGAGCTCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCCACCAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAATAATGAGAATAAGGATAATGTGGAAAAACAAGCCATTAGAGATCCTAATGTTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCTTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCCACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCCAGA
AGTTCTACAGAAAAATGCAAAAGGGCTAGAGCCAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGAGCAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGTAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCACTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CTAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.242	100	0.962