Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C9I28_RS05725 Genome accession   NZ_CP028324
Coordinates   1306897..1307292 (+) Length   131 a.a.
NCBI ID   WP_107140632.1    Uniprot ID   A0A2R4C6T0
Organism   Pseudoduganella armeniaca strain ZMN-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1301897..1312292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9I28_RS05705 (C9I28_05705) - 1302763..1304031 (-) 1269 WP_107140628.1 NRAMP family divalent metal transporter -
  C9I28_RS05710 (C9I28_05710) hemL 1304209..1305504 (-) 1296 WP_107140629.1 glutamate-1-semialdehyde 2,1-aminomutase -
  C9I28_RS05715 (C9I28_05715) - 1305501..1306433 (-) 933 WP_107140630.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  C9I28_RS05720 (C9I28_05720) - 1306553..1306705 (+) 153 WP_107140631.1 rubredoxin -
  C9I28_RS05725 (C9I28_05725) pilG 1306897..1307292 (+) 396 WP_107140632.1 PleD family two-component system response regulator Regulator
  C9I28_RS05730 (C9I28_05730) - 1307309..1307674 (+) 366 WP_107140633.1 PleD family two-component system response regulator -
  C9I28_RS05735 (C9I28_05735) - 1307674..1308252 (+) 579 WP_107140634.1 chemotaxis protein CheW -
  C9I28_RS05740 (C9I28_05740) - 1308297..1310623 (+) 2327 Protein_1147 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14192.39 Da        Isoelectric Point: 7.2425

>NTDB_id=284104 C9I28_RS05725 WP_107140632.1 1306897..1307292(+) (pilG) [Pseudoduganella armeniaca strain ZMN-3]
MTTTPQATGLKIMVIDDSSTIRRSAEIFLSQAGYEVVLAEDGFDALAKINDQHPALIFCDILMPRLDGYQTCALIKKSAK
FHAVPVLMLSSKDGLFDRARGAMVGSSAYLTKPFSKDSLLAAVREHTGQGQ

Nucleotide


Download         Length: 396 bp        

>NTDB_id=284104 C9I28_RS05725 WP_107140632.1 1306897..1307292(+) (pilG) [Pseudoduganella armeniaca strain ZMN-3]
ATGACGACAACGCCGCAAGCGACAGGTTTGAAAATCATGGTGATCGACGACAGCAGCACGATTCGCCGGTCCGCCGAGAT
CTTCCTCAGCCAGGCCGGCTATGAGGTCGTGCTGGCCGAAGACGGCTTCGACGCGCTGGCCAAGATCAACGACCAACATC
CGGCGCTGATCTTCTGCGACATCCTGATGCCCCGGCTGGACGGTTACCAGACCTGCGCGCTGATCAAGAAAAGCGCGAAA
TTCCATGCCGTGCCCGTGCTGATGCTGTCATCCAAGGATGGCCTGTTCGACCGCGCGCGTGGCGCCATGGTCGGCTCGTC
CGCCTATCTCACCAAACCCTTCAGCAAAGACAGCCTGCTGGCCGCCGTGCGCGAGCATACCGGCCAGGGCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2R4C6T0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.866

90.84

0.58

Multiple sequence alignment