Detailed information
Bioinformatically predicted
Overview
| Name | rpoS | Type | Regulator |
| Locus tag | EEL45_RS19505 | Genome accession | NZ_CP033605 |
| Coordinates | 3690400..3691392 (-) | Length | 330 a.a. |
| NCBI ID | WP_000081550.1 | Uniprot ID | A0A370V765 |
| Organism | Escherichia coli O157:H7 strain TR01 | ||
| Function | regulation of chitinases (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3685400..3696392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EEL45_RS19480 (EEL45_19480) | pphB | 3686762..3687418 (+) | 657 | WP_053291977.1 | protein-serine/threonine phosphatase | - |
| EEL45_RS19485 (EEL45_19485) | - | 3687459..3687695 (-) | 237 | WP_000562982.1 | non-oxidative hydroxyarylic acid decarboxylases subunit D | - |
| EEL45_RS19490 (EEL45_19490) | - | 3687706..3689133 (-) | 1428 | WP_123178583.1 | non-oxidative hydroxyarylic acid decarboxylases subunit C | - |
| EEL45_RS19495 (EEL45_19495) | - | 3689133..3689726 (-) | 594 | WP_123178584.1 | non-oxidative hydroxyarylic acid decarboxylases subunit B | - |
| EEL45_RS19500 (EEL45_19500) | - | 3689873..3690280 (+) | 408 | WP_001208062.1 | MarR family transcriptional regulator | - |
| EEL45_RS19505 (EEL45_19505) | rpoS | 3690400..3691392 (-) | 993 | WP_000081550.1 | RNA polymerase sigma factor RpoS | Regulator |
| EEL45_RS19510 (EEL45_19510) | nlpD | 3691455..3692549 (-) | 1095 | WP_306174120.1 | murein hydrolase activator NlpD | - |
| EEL45_RS19515 (EEL45_19515) | pcm | 3692734..3693360 (-) | 627 | WP_000254708.1 | protein-L-isoaspartate O-methyltransferase | - |
| EEL45_RS19520 (EEL45_19520) | surE | 3693354..3694115 (-) | 762 | WP_105462709.1 | 5'/3'-nucleotidase SurE | - |
| EEL45_RS19525 (EEL45_19525) | truD | 3694096..3695145 (-) | 1050 | WP_000568934.1 | tRNA pseudouridine(13) synthase TruD | - |
| EEL45_RS19530 (EEL45_19530) | ispF | 3695142..3695621 (-) | 480 | WP_001735626.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| EEL45_RS19535 (EEL45_19535) | ispD | 3695621..3696331 (-) | 711 | WP_000246138.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 330 a.a. Molecular weight: 37972.84 Da Isoelectric Point: 4.5597
>NTDB_id=283689 EEL45_RS19505 WP_000081550.1 3690400..3691392(-) (rpoS) [Escherichia coli O157:H7 strain TR01]
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFA
RRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQ
GLNIEALFRE
Nucleotide
Download Length: 993 bp
>NTDB_id=283689 EEL45_RS19505 WP_000081550.1 3690400..3691392(-) (rpoS) [Escherichia coli O157:H7 strain TR01]
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTTATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATTGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCATGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGAT
GAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTACTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAATAA
ATGAGTCAGAATACGCTGAAAGTTCATGATTTAAATGAAGATGCGGAATTTGATGAGAACGGAGTTGAGGTTTTTGACGA
AAAGGCCTTAGTAGAAGAGGAACCCAGTGATAACGATTTGGCCGAAGAGGAACTGTTATCGCAGGGAGCCACACAGCGTG
TGTTGGACGCGACTCAGCTTTACCTTGGTGAGATTGGTTATTCACCACTGTTAACGGCCGAAGAAGAAGTTTATTTTGCG
CGTCGCGCACTGCGTGGAGATGTCGCCTCTCGCCGCCGGATGATCGAGAGTAACTTGCGTCTGGTGGTAAAAATTGCCCG
CCGTTATGGCAATCGTGGTCTGGCGTTGCTGGACCTTATCGAAGAGGGCAACCTGGGGCTGATCCGCGCGGTAGAGAAGT
TTGACCCGGAACGTGGTTTCCGCTTCTCAACATACGCAACCTGGTGGATTCGCCAGACGATTGAACGGGCGATTATGAAC
CAAACCCGTACTATTCGTTTGCCGATTCACATCGTAAAGGAGCTGAACGTTTACCTGCGAACCGCACGTGAGTTGTCCCA
TAAGCTGGACCATGAACCAAGTGCGGAAGAGATCGCAGAGCAACTGGATAAGCCAGTTGATGACGTCAGCCGTATGCTTC
GTCTTAACGAGCGCATTACCTCGGTAGACACCCCGCTGGGTGGTGATTCCGAAAAAGCGTTGCTGGACATCCTGGCCGAT
GAAAAAGAGAACGGTCCGGAAGATACCACGCAAGATGACGATATGAAGCAGAGCATCGTCAAATGGCTGTTCGAGCTGAA
CGCCAAACAGCGTGAAGTACTGGCACGTCGATTCGGTTTGCTGGGGTACGAAGCGGCAACACTGGAAGATGTAGGTCGTG
AAATTGGCCTCACCCGTGAACGTGTTCGCCAGATTCAGGTTGAAGGCCTGCGCCGTTTGCGCGAAATCCTGCAAACGCAG
GGGCTGAATATCGAAGCGCTGTTCCGCGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rpoS | Vibrio cholerae O1 biovar El Tor strain E7946 |
73.065 |
97.879 |
0.715 |