Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   EES41_RS26905 Genome accession   NZ_CP033581
Coordinates   5993778..5994572 (-) Length   264 a.a.
NCBI ID   WP_008742948.1    Uniprot ID   A0ABZ1RJP0
Organism   Streptomyces sp. ADI95-16     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5988778..5999572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EES41_RS26890 (EES41_26885) - 5988869..5989507 (+) 639 WP_123080650.1 GNAT family N-acetyltransferase -
  EES41_RS26895 (EES41_26890) - 5989645..5991612 (+) 1968 WP_123080651.1 IucA/IucC family siderophore biosynthesis protein -
  EES41_RS26900 (EES41_26895) - 5991665..5993635 (+) 1971 WP_123080652.1 ATP-dependent DNA helicase -
  EES41_RS26905 (EES41_26900) dinR/lexA 5993778..5994572 (-) 795 WP_008742948.1 transcriptional repressor LexA Regulator
  EES41_RS26910 (EES41_26905) nrdR 5995040..5995552 (+) 513 WP_008742949.1 transcriptional regulator NrdR -
  EES41_RS26915 (EES41_26910) - 5995682..5998570 (+) 2889 WP_123080653.1 vitamin B12-dependent ribonucleotide reductase -
  EES41_RS26920 (EES41_26915) - 5998722..5999420 (+) 699 WP_355799569.1 DUF6215 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28575.37 Da        Isoelectric Point: 7.4240

>NTDB_id=283635 EES41_RS26905 WP_008742948.1 5993778..5994572(-) (dinR/lexA) [Streptomyces sp. ADI95-16]
MTTTADSAATITAQNRSQSRLEPVHAMNDASLNPEAEPVRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSSQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
AAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=283635 EES41_RS26905 WP_008742948.1 5993778..5994572(-) (dinR/lexA) [Streptomyces sp. ADI95-16]
GTGACCACCACCGCAGACAGTGCCGCCACCATCACTGCCCAGAACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCAT
GAACGACGCAAGCCTGAACCCGGAGGCGGAGCCCGTACGGCCCGCCCGCTCGCTGCCAGGTCGCCCTCCAGGCATCCGCG
CCGACAGCTCGGGGCTCACGGACCGGCAGCGGAGGGTCATCGAGGTCATTCGGGACTCCGTGCAGCGGCGGGGTTACCCG
CCGTCGATGCGGGAGATCGGCCAGGCGGTCGGCCTGTCGAGCACGTCGTCGGTCGCGCACCAGCTGATGGCCCTGGAGCG
CAAGGGCTTCCTGCGCCGCGACCCGCACCGCCCCCGGGCGTACGAGGTGCGCGGCTCCGACCAGCCGAGCTCGCAGCCCA
CGGACACCACGGGCAAGCCCGCGGCCTCCTACGTTCCCCTGGTCGGCCGGATCGCGGCCGGCGGCCCGATCCTCGCCGAG
GAGTCGGTGGAGGACGTGTTCCCGCTCCCCCGCCAGCTCGTCGGTGACGGCGAGCTCTTCGTCCTCAAGGTCGTCGGCGA
CTCGATGATCGAGGCCGCCATCTGTGACGGCGACTGGGTCACGGTCCGCCGCCAGCCCGTCGCGGAGAATGGCGACATCG
TCGCCGCCATGCTGGACGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTCCTCCCGCACAAC
GCCGCGTACCAGCCGATCCCCGGTGACGAGGCGACCATCCTCGGCAAGGTCGTCGCGGTACTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.698

80.303

0.375