Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C7M30_RS06140 Genome accession   NZ_CP028218
Coordinates   1148384..1149178 (-) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM102756     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1143384..1154178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS06105 (C7M30_01217) ephM 1144227..1145087 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  C7M30_RS06110 (C7M30_01218) spdL 1145074..1145406 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  C7M30_RS06115 (C7M30_01219) yfhK 1145491..1146009 (-) 519 WP_133953891.1 SH3 domain-containing protein -
  C7M30_RS06120 (C7M30_01220) yfhJ 1146154..1146423 (-) 270 WP_003243789.1 YfhJ family protein -
  C7M30_RS06125 (C7M30_01221) sspK 1146548..1146700 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C7M30_RS06130 (C7M30_01222) yfhI 1146732..1147925 (-) 1194 WP_072692836.1 MFS transporter -
  C7M30_RS06135 (C7M30_01224) yfhH 1148068..1148382 (-) 315 WP_003244592.1 YfhH family protein -
  C7M30_RS06140 (C7M30_01225) recX 1148384..1149178 (-) 795 WP_003243354.1 recombination regulator RecX Regulator
  C7M30_RS06145 (C7M30_01226) yfhF 1149267..1150178 (+) 912 WP_133953892.1 TIGR01777 family oxidoreductase -
  C7M30_RS06150 (C7M30_01227) yfhE 1150233..1150343 (+) 111 WP_003223230.1 YfhE family protein -
  C7M30_RS06155 (C7M30_01228) yfhD 1150410..1150601 (+) 192 WP_003233561.1 YfhD family protein -
  C7M30_RS06160 (C7M30_01229) yfhC 1150641..1151225 (-) 585 WP_133953893.1 nitroreductase -
  C7M30_RS06165 (C7M30_01230) yfhB 1151313..1152194 (-) 882 WP_133953894.1 PhzF family phenazine biosynthesis isomerase -
  C7M30_RS06170 (C7M30_01231) sxzA 1152309..1153340 (-) 1032 WP_133953895.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=283413 C7M30_RS06140 WP_003243354.1 1148384..1149178(-) (recX) [Bacillus subtilis strain SRCM102756]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=283413 C7M30_RS06140 WP_003243354.1 1148384..1149178(-) (recX) [Bacillus subtilis strain SRCM102756]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTGCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGGGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment