Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M30_RS04610 Genome accession   NZ_CP028218
Coordinates   866184..866375 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM102756     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 861184..871375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS04585 (C7M30_00921) appD 861521..862507 (-) 987 WP_160244042.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C7M30_RS04590 (C7M30_00922) yjaZ 862699..863484 (-) 786 WP_160244043.1 DUF2268 domain-containing protein -
  C7M30_RS04595 (C7M30_00923) fabF 863560..864801 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M30_RS04600 (C7M30_00924) fabH 864824..865762 (-) 939 WP_160244044.1 beta-ketoacyl-ACP synthase III -
  C7M30_RS04605 (C7M30_00925) yjzB 865927..866154 (+) 228 WP_120027973.1 spore coat protein YjzB -
  C7M30_RS04610 (C7M30_00926) comZ 866184..866375 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C7M30_RS04615 (C7M30_00927) med 866390..867343 (-) 954 WP_160244045.1 transcriptional regulator Med Regulator
  C7M30_RS04620 (C7M30_00928) - 867434..867991 (-) 558 WP_014476424.1 hypothetical protein -
  C7M30_RS04625 (C7M30_00929) - 868073..868807 (-) 735 WP_003245223.1 hypothetical protein -
  C7M30_RS04630 (C7M30_00930) yjzD 869056..869241 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C7M30_RS04635 (C7M30_00931) yjzC 869288..869467 (-) 180 WP_003245356.1 YjzC family protein -
  C7M30_RS04640 (C7M30_00932) argF 869553..870512 (-) 960 WP_032721338.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=283404 C7M30_RS04610 WP_003224559.1 866184..866375(-) (comZ) [Bacillus subtilis strain SRCM102756]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=283404 C7M30_RS04610 WP_003224559.1 866184..866375(-) (comZ) [Bacillus subtilis strain SRCM102756]
ATGCAACACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment