Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C7M30_RS03155 Genome accession   NZ_CP028218
Coordinates   601794..602258 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM102756     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 596794..607258
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS03135 (C7M30_00632) fadH 597982..598746 (-) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -
  C7M30_RS03140 (C7M30_00633) ppeE 598889..599749 (+) 861 WP_003232400.1 metallophosphoesterase -
  C7M30_RS03145 (C7M30_00634) ltdD 599806..600300 (+) 495 WP_072174092.1 L,D-transpeptidase family protein -
  C7M30_RS03150 (C7M30_00635) ykuC 600376..601668 (+) 1293 WP_014479656.1 MFS transporter -
  C7M30_RS03155 (C7M30_00636) kre 601794..602258 (+) 465 WP_003232406.1 YkyB family protein Regulator
  C7M30_RS03160 (C7M30_00637) cheV 602302..603213 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  C7M30_RS03165 (C7M30_00638) - 603417..603578 (+) 162 WP_014476654.1 hypothetical protein -
  C7M30_RS03170 (C7M30_00639) dapX 603780..604961 (+) 1182 WP_021479391.1 aminotransferase A -
  C7M30_RS03175 (C7M30_00640) kinA 604971..606791 (-) 1821 WP_015252197.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=283396 C7M30_RS03155 WP_003232406.1 601794..602258(+) (kre) [Bacillus subtilis strain SRCM102756]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=283396 C7M30_RS03155 WP_003232406.1 601794..602258(+) (kre) [Bacillus subtilis strain SRCM102756]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment