Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | C7M30_RS00490 | Genome accession | NZ_CP028218 |
| Coordinates | 118663..119799 (+) | Length | 378 a.a. |
| NCBI ID | WP_160243756.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM102756 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 113663..124799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M30_RS00450 (C7M30_00087) | - | 113817..114212 (-) | 396 | WP_250622422.1 | UPF0715 family protein | - |
| C7M30_RS00455 (C7M30_00088) | - | 114237..114512 (-) | 276 | WP_160243752.1 | hypothetical protein | - |
| C7M30_RS00460 (C7M30_00089) | - | 114555..114908 (-) | 354 | WP_133953886.1 | hypothetical protein | - |
| C7M30_RS00465 (C7M30_00090) | ynaE | 115023..115655 (-) | 633 | WP_160243753.1 | DUF3885 domain-containing protein | - |
| C7M30_RS00470 (C7M30_00091) | - | 115652..115882 (-) | 231 | WP_160243754.1 | helix-turn-helix transcriptional regulator | - |
| C7M30_RS00475 (C7M30_00092) | - | 116461..116841 (-) | 381 | WP_015713980.1 | UPF0715 family protein | - |
| C7M30_RS22160 | - | 116930..117833 (-) | 904 | Protein_98 | CPBP family intramembrane glutamic endopeptidase | - |
| C7M30_RS00485 (C7M30_00095) | ynaD | 117912..118448 (-) | 537 | WP_160243755.1 | GNAT family protein | - |
| C7M30_RS00490 (C7M30_00096) | rapC | 118663..119799 (+) | 1137 | WP_160243756.1 | Rap family tetratricopeptide repeat protein | Regulator |
| C7M30_RS00495 (C7M30_00097) | - | 119789..119968 (+) | 180 | WP_160243757.1 | aspartate phosphatase | - |
| C7M30_RS21810 | - | 120156..120279 (-) | 124 | Protein_102 | YolD-like family protein | - |
| C7M30_RS00505 (C7M30_00098) | - | 120834..122210 (+) | 1377 | WP_160244974.1 | glycosyltransferase | - |
| C7M30_RS00510 (C7M30_00099) | - | 122207..123313 (+) | 1107 | WP_029726889.1 | glycosyltransferase | - |
| C7M30_RS00515 (C7M30_00100) | - | 123300..124007 (+) | 708 | WP_160243758.1 | class I SAM-dependent methyltransferase | - |
| C7M30_RS00520 (C7M30_00101) | - | 124004..124675 (+) | 672 | WP_160243759.1 | glycosyltransferase family protein | - |
Sequence
Protein
Download Length: 378 a.a. Molecular weight: 44899.40 Da Isoelectric Point: 5.6260
>NTDB_id=283389 C7M30_RS00490 WP_160243756.1 118663..119799(+) (rapC) [Bacillus subtilis strain SRCM102756]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPKIS
DLLEKIESNQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKIAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMAFPEKAIPHFKDALDKSREINMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDKGYEHSNRLLDILLMLTKTTFKMKNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIQALYVDNDKEKLN
SILNYLEVKSMLSDMEDLASDAAKYYNEKKDHKVAVTYYEKVLYARKQIQRGDCLYET
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTMNEERPKIS
DLLEKIESNQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKIAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMAFPEKAIPHFKDALDKSREINMSRLIGSSLYNLGLCSFAEEAYEKAS
EYFKEGIRVYQDKGYEHSNRLLDILLMLTKTTFKMKNHSEGISWCAHGLSLSKNLNDEIMAKMFEFIQALYVDNDKEKLN
SILNYLEVKSMLSDMEDLASDAAKYYNEKKDHKVAVTYYEKVLYARKQIQRGDCLYET
Nucleotide
Download Length: 1137 bp
>NTDB_id=283389 C7M30_RS00490 WP_160243756.1 118663..119799(+) (rapC) [Bacillus subtilis strain SRCM102756]
TTGGAGCAAATGATCTCTTCTTCTAAAGTCGGAGTAAAAATAAATGAGTGGTATAAATACATAAGATTGTTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAAGTCGAGGAAGAAATAAGGCATATGAAGGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAATTGATGTTGGATTACCTTGAACCCAAAACAATGAACGAGGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATTGAAAGTAACCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAATTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCGGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAACGAGCAGAATTCCACTACAAAATTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAT
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTCATCGG
TCTGAACTATTTAGATATGGCCTTCCCTGAAAAAGCGATCCCTCATTTTAAAGATGCCCTAGACAAATCTAGAGAAATCA
ATATGTCACGATTAATCGGATCATCTCTGTACAATCTTGGTTTATGTTCATTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTTAAGGAGGGCATTAGAGTATACCAGGATAAGGGATATGAGCACTCAAATCGTTTATTAGACATCTTACTTAT
GTTGACAAAAACCACATTTAAAATGAAAAACCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAATGATGAGATTATGGCAAAAATGTTTGAATTCATTCAGGCCTTATATGTAGATAACGACAAAGAAAAATTAAAT
TCGATTTTAAATTATTTAGAAGTAAAATCAATGCTTTCAGACATGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAAAAGACCATAAAGTGGCTGTTACTTATTATGAGAAAGTACTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA
TTGGAGCAAATGATCTCTTCTTCTAAAGTCGGAGTAAAAATAAATGAGTGGTATAAATACATAAGATTGTTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAAGTCGAGGAAGAAATAAGGCATATGAAGGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAATTGATGTTGGATTACCTTGAACCCAAAACAATGAACGAGGAACGCCCTAAAATTTCA
GACTTATTAGAAAAGATTGAAAGTAACCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAATTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCGGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAACGAGCAGAATTCCACTACAAAATTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAT
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTCATCGG
TCTGAACTATTTAGATATGGCCTTCCCTGAAAAAGCGATCCCTCATTTTAAAGATGCCCTAGACAAATCTAGAGAAATCA
ATATGTCACGATTAATCGGATCATCTCTGTACAATCTTGGTTTATGTTCATTTGCTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTTAAGGAGGGCATTAGAGTATACCAGGATAAGGGATATGAGCACTCAAATCGTTTATTAGACATCTTACTTAT
GTTGACAAAAACCACATTTAAAATGAAAAACCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAATGATGAGATTATGGCAAAAATGTTTGAATTCATTCAGGCCTTATATGTAGATAACGACAAAGAAAAATTAAAT
TCGATTTTAAATTATTTAGAAGTAAAATCAATGCTTTCAGACATGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAAAAGACCATAAAGTGGCTGTTACTTATTATGAGAAAGTACTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
48.276 |
99.735 |
0.481 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
45.789 |
100 |
0.46 |