Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   C7M29_RS18155 Genome accession   NZ_CP028217
Coordinates   3552209..3552673 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM102751     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3547209..3557673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS18135 (C7M29_03566) fadH 3548397..3549161 (-) 765 WP_161477021.1 2,4-dienoyl-CoA reductase -
  C7M29_RS18140 (C7M29_03567) ppeE 3549304..3550164 (+) 861 WP_024573035.1 metallophosphoesterase -
  C7M29_RS18145 (C7M29_03568) ltdD 3550221..3550715 (+) 495 WP_161477165.1 L,D-transpeptidase family protein -
  C7M29_RS18150 (C7M29_03569) ykuC 3550791..3552083 (+) 1293 WP_015252195.1 MFS transporter -
  C7M29_RS18155 (C7M29_03570) kre 3552209..3552673 (+) 465 WP_003232406.1 YkyB family protein Regulator
  C7M29_RS18160 (C7M29_03571) cheV 3552717..3553628 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  C7M29_RS18165 (C7M29_03572) - 3553832..3553993 (+) 162 WP_003245246.1 hypothetical protein -
  C7M29_RS18170 (C7M29_03573) dapX 3554195..3555376 (+) 1182 WP_014476653.1 aminotransferase A -
  C7M29_RS18175 (C7M29_03574) kinA 3555386..3557206 (-) 1821 WP_080529263.1 sporulation histidine kinase KinA -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=283372 C7M29_RS18155 WP_003232406.1 3552209..3552673(+) (kre) [Bacillus subtilis strain SRCM102751]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=283372 C7M29_RS18155 WP_003232406.1 3552209..3552673(+) (kre) [Bacillus subtilis strain SRCM102751]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAGCCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment