Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M29_RS18045 Genome accession   NZ_CP028217
Coordinates   3532860..3533444 (-) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain SRCM102751     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3527860..3538444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS18020 (C7M29_03543) mobB 3528256..3528777 (-) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  C7M29_RS18025 (C7M29_03544) glp 3528738..3530030 (-) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  C7M29_RS18030 (C7M29_03545) moeB 3530048..3531067 (-) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M29_RS18035 (C7M29_03546) mobA 3531118..3531717 (-) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  C7M29_RS18040 (C7M29_03547) cse15 3531854..3532819 (+) 966 WP_161477017.1 spore protein Cse15 -
  C7M29_RS18045 (C7M29_03548) rok 3532860..3533444 (-) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  C7M29_RS18050 (C7M29_03549) ykuV 3533910..3534356 (-) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  C7M29_RS18055 (C7M29_03550) ahpA 3534428..3534970 (-) 543 WP_038427629.1 biofilm-specific peroxidase AhpA -
  C7M29_RS18060 (C7M29_03551) mscT 3535207..3536010 (+) 804 WP_161477018.1 small-conductance mechanosensitive channel protein MscT -
  C7M29_RS18065 (C7M29_03552) ykuS 3536047..3536292 (-) 246 WP_003232382.1 YkuS family protein -
  C7M29_RS18070 (C7M29_03553) dapI 3536354..3537478 (-) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  C7M29_RS18075 (C7M29_03554) dapD 3537548..3538258 (-) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=283371 C7M29_RS18045 WP_014113628.1 3532860..3533444(-) (rok) [Bacillus subtilis strain SRCM102751]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=283371 C7M29_RS18045 WP_014113628.1 3532860..3533444(-) (rok) [Bacillus subtilis strain SRCM102751]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment