Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   C7M29_RS13665 Genome accession   NZ_CP028217
Coordinates   2621712..2622515 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2616712..2627515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS13645 (C7M29_02679) yqxC 2616823..2617668 (+) 846 WP_003230264.1 TlyA family RNA methyltransferase -
  C7M29_RS13650 (C7M29_02680) argR 2617766..2618215 (+) 450 WP_003230265.1 arginine repressor ArgR -
  C7M29_RS13655 (C7M29_02681) recN 2618252..2619982 (+) 1731 WP_128993138.1 DNA repair protein RecN Machinery gene
  C7M29_RS13660 (C7M29_02682) spoIVB 2620156..2621436 (+) 1281 WP_014480228.1 SpoIVB peptidase -
  C7M29_RS13665 (C7M29_02683) spo0A 2621712..2622515 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  C7M29_RS13670 (C7M29_02685) yqiG 2622980..2624098 (-) 1119 WP_161476874.1 NADH-dependent flavin oxidoreductase -
  C7M29_RS13675 - 2624171..2624323 (-) 153 WP_014480226.1 hypothetical protein -
  C7M29_RS13680 (C7M29_02686) - 2624631..2624927 (+) 297 WP_014480225.1 hypothetical protein -
  C7M29_RS13685 (C7M29_02687) yqiI 2624947..2625567 (+) 621 WP_072173938.1 N-acetylmuramoyl-L-alanine amidase -
  C7M29_RS13690 (C7M29_02688) glpQB 2625646..2626377 (+) 732 WP_015714234.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=283363 C7M29_RS13665 WP_003226427.1 2621712..2622515(+) (spo0A) [Bacillus subtilis strain SRCM102751]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=283363 C7M29_RS13665 WP_003226427.1 2621712..2622515(+) (spo0A) [Bacillus subtilis strain SRCM102751]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCAGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGTCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGTCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment