Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   C7M29_RS13475 Genome accession   NZ_CP028217
Coordinates   2587920..2588093 (-) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus subtilis strain SRCM102751     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 2582920..2593093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS13430 (C7M29_02636) comGE 2583270..2583617 (+) 348 WP_033884703.1 ComG operon protein 5 Machinery gene
  C7M29_RS13435 comGF 2583643..2584026 (+) 384 WP_032726158.1 ComG operon protein ComGF Machinery gene
  C7M29_RS13440 (C7M29_02638) comGG 2584027..2584401 (+) 375 WP_033884701.1 ComG operon protein ComGG Machinery gene
  C7M29_RS13445 (C7M29_02639) spoIITA 2584473..2584652 (+) 180 WP_014480252.1 YqzE family protein -
  C7M29_RS13450 (C7M29_02640) yqzG 2584694..2585020 (-) 327 WP_003246051.1 YqzG/YhdC family protein -
  C7M29_RS13455 (C7M29_02641) tapA 2585292..2586053 (+) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  C7M29_RS13460 (C7M29_02642) sipW 2586037..2586609 (+) 573 WP_106073729.1 signal peptidase I SipW -
  C7M29_RS13465 (C7M29_02643) tasA 2586673..2587458 (+) 786 WP_161476870.1 biofilm matrix protein TasA -
  C7M29_RS13470 (C7M29_02644) sinR 2587551..2587886 (-) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  C7M29_RS13475 (C7M29_02645) sinI 2587920..2588093 (-) 174 WP_003230187.1 anti-repressor SinI Regulator
  C7M29_RS13480 (C7M29_02646) yqhG 2588276..2589070 (-) 795 WP_003230200.1 YqhG family protein -
  C7M29_RS13485 (C7M29_02647) hepAA 2589091..2590764 (-) 1674 WP_003230203.1 SNF2-related protein -
  C7M29_RS13490 (C7M29_02648) gcvT 2591206..2592294 (+) 1089 WP_029317919.1 glycine cleavage system aminomethyltransferase GcvT -

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=283361 C7M29_RS13475 WP_003230187.1 2587920..2588093(-) (sinI) [Bacillus subtilis strain SRCM102751]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=283361 C7M29_RS13475 WP_003230187.1 2587920..2588093(-) (sinI) [Bacillus subtilis strain SRCM102751]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment