Detailed information NTG0283358

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EDM51_RS16745
• Genome accession: NZ_CP033401
• Coordinates: 3279446..3280471 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WCHEC020031
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3274446..3285471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EDM51_RS16735 (EDM51_16735)	rpmE	3276677..3276889 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EDM51_RS16740 (EDM51_16740)	priA	3277092..3279290 (+)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
EDM51_RS16745 (EDM51_16745)	cytR	3279446..3280471 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EDM51_RS16750 (EDM51_16750)	ftsN	3280563..3281522 (+)	960	WP_000068837.1	cell division protein FtsN	-
EDM51_RS16755 (EDM51_16755)	hslV	3281615..3282145 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EDM51_RS16760 (EDM51_16760)	hslU	3282155..3283486 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EDM51_RS16765 (EDM51_16765)	menA	3283553..3284479 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EDM51_RS16770 (EDM51_16770)	rraA	3284572..3285057 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EDM51_RS16775 (EDM51_16775)	zapB	3285142..3285387 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=283358 EDM51_RS16745 WP_000644904.1 3279446..3280471(+) (cytR) [Escherichia coli strain WCHEC020031]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=283358 EDM51_RS16745 WP_000644904.1 3279446..3280471(+) (cytR) [Escherichia coli strain WCHEC020031]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628