Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   C7M29_RS02890 Genome accession   NZ_CP028217
Coordinates   573932..574330 (+) Length   132 a.a.
NCBI ID   WP_029317188.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 568932..579330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS02865 (C7M29_00571) hxlR 569668..570030 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  C7M29_RS02870 (C7M29_00572) hxlA 570262..570894 (+) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  C7M29_RS02875 (C7M29_00573) hxlB 570900..571457 (+) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  C7M29_RS02880 (C7M29_00574) tlpC 571567..573288 (+) 1722 WP_106074178.1 methyl-accepting chemotaxis protein TlpC -
  C7M29_RS02885 (C7M29_00575) nucA/comI 573456..573905 (+) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  C7M29_RS02890 (C7M29_00576) nin/comJ 573932..574330 (+) 399 WP_029317188.1 DNA-entry nuclease inhibitor Regulator
  C7M29_RS02895 (C7M29_00577) bglC 574367..575800 (-) 1434 WP_029317189.1 6-phospho-beta-glucosidase -
  C7M29_RS02900 (C7M29_00578) yckD 575954..576286 (-) 333 WP_015252849.1 YckD family protein -
  C7M29_RS02905 (C7M29_00579) yckC 576368..576823 (-) 456 WP_029317190.1 RDD family protein -
  C7M29_RS02910 - 576842..577038 (-) 197 Protein_552 hypothetical protein -
  C7M29_RS02915 (C7M29_00580) yckB 577200..578063 (+) 864 WP_009966510.1 transporter substrate-binding domain-containing protein -
  C7M29_RS02920 (C7M29_00581) yckA 578073..578753 (+) 681 WP_024572176.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14951.95 Da        Isoelectric Point: 4.8991

>NTDB_id=283316 C7M29_RS02890 WP_029317188.1 573932..574330(+) (nin/comJ) [Bacillus subtilis strain SRCM102751]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVLAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=283316 C7M29_RS02890 WP_029317188.1 573932..574330(+) (nin/comJ) [Bacillus subtilis strain SRCM102751]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCTGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977

Multiple sequence alignment