Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C7M29_RS00380 Genome accession   NZ_CP028217
Coordinates   54655..55449 (-) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 49655..60449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS00345 (C7M29_00067) ephM 50498..51358 (-) 861 WP_003243419.1 epoxide hydrolase EphM -
  C7M29_RS00350 (C7M29_00068) spdL 51345..51677 (-) 333 WP_003242803.1 SdpC immunity protein SpdL -
  C7M29_RS00355 (C7M29_00069) yfhK 51762..52280 (-) 519 WP_015252515.1 SH3 domain-containing protein -
  C7M29_RS00360 (C7M29_00070) yfhJ 52425..52694 (-) 270 WP_003243789.1 YfhJ family protein -
  C7M29_RS00365 (C7M29_00071) sspK 52819..52971 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C7M29_RS00370 (C7M29_00072) yfhI 53003..54196 (-) 1194 WP_072692836.1 MFS transporter -
  C7M29_RS00375 (C7M29_00073) yfhH 54333..54653 (-) 321 WP_029726843.1 YfhH family protein -
  C7M29_RS00380 (C7M29_00074) recX 54655..55449 (-) 795 WP_029726844.1 recombination regulator RecX Regulator
  C7M29_RS00385 (C7M29_00075) yfhF 55538..56455 (+) 918 WP_161476348.1 TIGR01777 family oxidoreductase -
  C7M29_RS00390 (C7M29_00076) yfhE 56510..56620 (+) 111 WP_003223230.1 YfhE family protein -
  C7M29_RS00395 (C7M29_00077) yfhD 56687..56878 (+) 192 WP_003233561.1 YfhD family protein -
  C7M29_RS00400 (C7M29_00078) yfhC 56917..57501 (-) 585 WP_003243940.1 nitroreductase -
  C7M29_RS00405 (C7M29_00079) yfhB 57589..58470 (-) 882 WP_144530880.1 PhzF family phenazine biosynthesis isomerase -
  C7M29_RS00410 (C7M29_00080) sxzA 58585..59616 (-) 1032 WP_161476349.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=283310 C7M29_RS00380 WP_029726844.1 54655..55449(-) (recX) [Bacillus subtilis strain SRCM102751]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=283310 C7M29_RS00380 WP_029726844.1 54655..55449(-) (recX) [Bacillus subtilis strain SRCM102751]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment