Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C7M28_RS19505 Genome accession   NZ_CP028215
Coordinates   3729580..3730155 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102750     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3724580..3735155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS19475 (C7M28_03830) dapD 3724768..3725478 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C7M28_RS19480 (C7M28_03831) dapI 3725548..3726672 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  C7M28_RS19485 (C7M28_03832) ykuS 3726734..3726979 (+) 246 WP_003232382.1 YkuS family protein -
  C7M28_RS19490 (C7M28_03833) mscT 3727016..3727819 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C7M28_RS19495 (C7M28_03834) ahpA 3728056..3728598 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C7M28_RS19500 (C7M28_03835) ykuV 3728668..3729114 (+) 447 WP_024571971.1 thiol-disulfide oxidoreductase YkuV -
  C7M28_RS19505 (C7M28_03836) rok 3729580..3730155 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  C7M28_RS19510 (C7M28_03837) cse15 3730196..3731161 (-) 966 WP_024571970.1 spore protein Cse15 -
  C7M28_RS19515 (C7M28_03838) mobA 3731298..3731897 (+) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  C7M28_RS19520 (C7M28_03839) moeB 3731948..3732967 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  C7M28_RS19525 (C7M28_03840) glp 3732985..3734277 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  C7M28_RS19530 (C7M28_03841) mobB 3734238..3734759 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=283303 C7M28_RS19505 WP_003232378.1 3729580..3730155(+) (rok) [Bacillus subtilis strain SRCM102750]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=283303 C7M28_RS19505 WP_003232378.1 3729580..3730155(+) (rok) [Bacillus subtilis strain SRCM102750]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment