Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C7M28_RS17935 Genome accession   NZ_CP028215
Coordinates   3446622..3446813 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain SRCM102750     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3441622..3451813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS17905 (C7M28_03516) argF 3442486..3443445 (+) 960 WP_014479432.1 ornithine carbamoyltransferase -
  C7M28_RS17910 (C7M28_03517) yjzC 3443531..3443710 (+) 180 WP_003245356.1 YjzC family protein -
  C7M28_RS17915 (C7M28_03518) yjzD 3443756..3443941 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C7M28_RS17920 (C7M28_03519) - 3444190..3444924 (+) 735 WP_014479433.1 hypothetical protein -
  C7M28_RS17925 (C7M28_03520) - 3445006..3445563 (+) 558 WP_014479435.1 hypothetical protein -
  C7M28_RS17930 (C7M28_03521) med 3445654..3446607 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  C7M28_RS17935 (C7M28_03522) comZ 3446622..3446813 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  C7M28_RS17940 (C7M28_03523) yjzB 3446843..3447082 (-) 240 WP_003232972.1 spore coat protein YjzB -
  C7M28_RS17945 (C7M28_03524) fabH 3447247..3448185 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C7M28_RS17950 (C7M28_03525) fabF 3448208..3449449 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C7M28_RS17955 (C7M28_03526) yjaZ 3449525..3450310 (+) 786 WP_160216284.1 DUF2268 domain-containing protein -
  C7M28_RS17960 (C7M28_03527) appD 3450502..3451488 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=283294 C7M28_RS17935 WP_046380930.1 3446622..3446813(+) (comZ) [Bacillus subtilis strain SRCM102750]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=283294 C7M28_RS17935 WP_046380930.1 3446622..3446813(+) (comZ) [Bacillus subtilis strain SRCM102750]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968

Multiple sequence alignment