Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C7M28_RS16400 Genome accession   NZ_CP028215
Coordinates   3163209..3164003 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM102750     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3158209..3169003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS16370 (C7M28_03219) sxzA 3159048..3160079 (+) 1032 WP_160216281.1 iron ABC transporter permease -
  C7M28_RS16375 (C7M28_03220) yfhB 3160194..3161075 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  C7M28_RS16380 (C7M28_03221) yfhC 3161163..3161747 (+) 585 WP_046160214.1 nitroreductase -
  C7M28_RS16385 (C7M28_03222) yfhD 3161786..3161977 (-) 192 WP_003233561.1 YfhD family protein -
  C7M28_RS16390 (C7M28_03223) yfhE 3162044..3162154 (-) 111 WP_003223230.1 YfhE family protein -
  C7M28_RS16395 (C7M28_03224) yfhF 3162209..3163120 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  C7M28_RS16400 (C7M28_03225) recX 3163209..3164003 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  C7M28_RS16405 (C7M28_03226) yfhH 3164005..3164319 (+) 315 WP_003244592.1 YfhH family protein -
  C7M28_RS16410 (C7M28_03228) yfhI 3164462..3165655 (+) 1194 WP_003243500.1 MFS transporter -
  C7M28_RS16415 (C7M28_03229) sspK 3165687..3165839 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C7M28_RS16420 (C7M28_03230) yfhJ 3165964..3166233 (+) 270 WP_003243789.1 YfhJ family protein -
  C7M28_RS16425 (C7M28_03231) yfhK 3166378..3166896 (+) 519 WP_029726841.1 SH3 domain-containing protein -
  C7M28_RS16430 (C7M28_03232) spdL 3166981..3167298 (+) 318 WP_032679045.1 SdpC immunity protein SpdL -
  C7M28_RS16435 (C7M28_03233) ephM 3167300..3168160 (+) 861 WP_029726839.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=283285 C7M28_RS16400 WP_003243354.1 3163209..3164003(+) (recX) [Bacillus subtilis strain SRCM102750]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=283285 C7M28_RS16400 WP_003243354.1 3163209..3164003(+) (recX) [Bacillus subtilis strain SRCM102750]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment