Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | C7M28_RS12035 | Genome accession | NZ_CP028215 |
| Coordinates | 2303377..2303667 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SRCM102750 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2298377..2308667
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M28_RS11995 (C7M28_02361) | darA | 2298400..2298729 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| C7M28_RS12000 (C7M28_02362) | yaaR | 2298742..2299182 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| C7M28_RS12005 (C7M28_02363) | holB | 2299194..2300183 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| C7M28_RS12010 (C7M28_02364) | ricT | 2300186..2301013 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| C7M28_RS12015 (C7M28_02365) | yabA | 2301028..2301387 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| C7M28_RS12020 (C7M28_02366) | trmNF | 2301446..2302189 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| C7M28_RS12025 (C7M28_02367) | yazA | 2302176..2302475 (+) | 300 | WP_046380716.1 | GIY-YIG nuclease family protein | - |
| C7M28_RS12030 (C7M28_02368) | rsmI | 2302450..2303328 (+) | 879 | WP_046380717.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| C7M28_RS12035 (C7M28_02369) | abrB | 2303377..2303667 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| C7M28_RS12040 (C7M28_02370) | metG | 2304162..2306156 (+) | 1995 | WP_015382561.1 | methionine--tRNA ligase | - |
| C7M28_RS12045 (C7M28_02371) | dayD | 2306236..2307003 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| C7M28_RS12050 (C7M28_02372) | yabE | 2307159..2308472 (+) | 1314 | WP_046380719.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=283270 C7M28_RS12035 WP_003226760.1 2303377..2303667(-) (abrB) [Bacillus subtilis strain SRCM102750]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=283270 C7M28_RS12035 WP_003226760.1 2303377..2303667(-) (abrB) [Bacillus subtilis strain SRCM102750]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |