Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C7M27_RS22095 Genome accession   NZ_CP028213
Coordinates   3307507..3307647 (-) Length   46 a.a.
NCBI ID   WP_250634839.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102749     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3302507..3312647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS22090 - 3306389..3307561 (-) 1173 Protein_3404 condensation domain-containing protein -
  C7M27_RS22095 comS 3307507..3307647 (-) 141 WP_250634839.1 competence protein ComS Regulator
  C7M27_RS22100 srfAB 3307739..3310783 (-) 3045 Protein_3406 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.09 Da        Isoelectric Point: 9.8310

>NTDB_id=283225 C7M27_RS22095 WP_250634839.1 3307507..3307647(-) (comS) [Bacillus subtilis strain SRCM102749]
MNRSGKHLISSIILYPRPSGECISSISLDKQTKATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=283225 C7M27_RS22095 WP_250634839.1 3307507..3307647(-) (comS) [Bacillus subtilis strain SRCM102749]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACAAAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment