Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   C7M27_RS11230 Genome accession   NZ_CP028213
Coordinates   2183704..2184168 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM102749     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 2178704..2189168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS11210 (C7M27_02210) fadH 2179892..2180656 (-) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -
  C7M27_RS11215 (C7M27_02211) ppeE 2180799..2181659 (+) 861 WP_128740300.1 metallophosphoesterase -
  C7M27_RS11220 (C7M27_02212) ltdD 2181716..2182210 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  C7M27_RS11225 (C7M27_02213) ykuC 2182286..2183578 (+) 1293 WP_014479656.1 MFS transporter -
  C7M27_RS11230 (C7M27_02214) kre 2183704..2184168 (+) 465 WP_003232406.1 YkyB family protein Regulator
  C7M27_RS11235 (C7M27_02215) cheV 2184212..2185123 (-) 912 WP_014476655.1 chemotaxis protein CheV -
  C7M27_RS11240 (C7M27_02216) - 2185327..2185488 (+) 162 WP_014476654.1 hypothetical protein -
  C7M27_RS11245 (C7M27_02217) dapX 2185690..2186871 (+) 1182 WP_101502064.1 aminotransferase A -
  C7M27_RS11250 (C7M27_02218) kinA 2186881..2188701 (-) 1821 WP_015252197.1 sporulation histidine kinase KinA -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=283187 C7M27_RS11230 WP_003232406.1 2183704..2184168(+) (kre) [Bacillus subtilis strain SRCM102749]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=283187 C7M27_RS11230 WP_003232406.1 2183704..2184168(+) (kre) [Bacillus subtilis strain SRCM102749]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGAGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment