Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C7M26_RS22185 Genome accession   NZ_CP028212
Coordinates   2340439..2340579 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain SRCM102748     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2335439..2345579
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS22180 - 2339321..2340493 (-) 1173 Protein_2459 condensation domain-containing protein -
  C7M26_RS22185 comS 2340439..2340579 (-) 141 WP_010886404.1 competence protein ComS Regulator
  C7M26_RS22190 srfAB 2340671..2343712 (-) 3042 Protein_2461 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=283146 C7M26_RS22185 WP_010886404.1 2340439..2340579(-) (comS) [Bacillus subtilis strain SRCM102748]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=283146 C7M26_RS22185 WP_010886404.1 2340439..2340579(-) (comS) [Bacillus subtilis strain SRCM102748]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment