Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C7M26_RS09920 Genome accession   NZ_CP028212
Coordinates   1842379..1843173 (-) Length   264 a.a.
NCBI ID   WP_003233555.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102748     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1837379..1848173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS09885 (C7M26_01944) ephM 1838221..1839081 (-) 861 WP_003233547.1 epoxide hydrolase EphM -
  C7M26_RS09890 (C7M26_01945) spdL 1839068..1839400 (-) 333 WP_032677433.1 SdpC immunity protein SpdL -
  C7M26_RS09895 (C7M26_01946) yfhK 1839485..1840003 (-) 519 WP_032677434.1 SH3 domain-containing protein -
  C7M26_RS09900 (C7M26_01947) yfhJ 1840148..1840417 (-) 270 WP_003243789.1 YfhJ family protein -
  C7M26_RS09905 (C7M26_01948) sspK 1840542..1840694 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C7M26_RS09910 (C7M26_01949) yfhI 1840726..1841919 (-) 1194 WP_080010604.1 MFS transporter -
  C7M26_RS09915 (C7M26_01950) yfhH 1842063..1842377 (-) 315 WP_003233553.1 YfhH family protein -
  C7M26_RS09920 (C7M26_01951) recX 1842379..1843173 (-) 795 WP_003233555.1 recombination regulator RecX Regulator
  C7M26_RS09925 (C7M26_01952) yfhF 1843262..1844173 (+) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  C7M26_RS09930 (C7M26_01953) yfhE 1844228..1844338 (+) 111 WP_003223230.1 YfhE family protein -
  C7M26_RS09935 (C7M26_01954) yfhD 1844405..1844596 (+) 192 WP_003233561.1 YfhD family protein -
  C7M26_RS09940 (C7M26_01955) yfhC 1844635..1845219 (-) 585 WP_032723010.1 nitroreductase -
  C7M26_RS09945 (C7M26_01956) yfhB 1845307..1846188 (-) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  C7M26_RS09950 (C7M26_01957) sxzA 1846303..1847334 (-) 1032 WP_003233568.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31001.22 Da        Isoelectric Point: 6.6686

>NTDB_id=283108 C7M26_RS09920 WP_003233555.1 1842379..1843173(-) (recX) [Bacillus subtilis strain SRCM102748]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTKE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=283108 C7M26_RS09920 WP_003233555.1 1842379..1843173(-) (recX) [Bacillus subtilis strain SRCM102748]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATCGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAAGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment