Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EB817_RS05530 Genome accession   NZ_CP033336
Coordinates   1065848..1066324 (-) Length   158 a.a.
NCBI ID   WP_115225072.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1060848..1071324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS05515 (EB817_05520) fbp54 1061661..1063313 (+) 1653 WP_030125975.1 Rqc2 family fibronectin-binding protein Fbp54 -
  EB817_RS05520 (EB817_05525) - 1063372..1064619 (-) 1248 WP_129304776.1 tetratricopeptide repeat protein -
  EB817_RS05525 (EB817_05530) - 1064609..1065790 (-) 1182 WP_011284730.1 AI-2E family transporter -
  EB817_RS05530 (EB817_05535) mutX 1065848..1066324 (-) 477 WP_115225072.1 8-oxo-dGTP diphosphatase Machinery gene
  EB817_RS05535 (EB817_05540) rfbB 1066545..1067585 (-) 1041 WP_002984881.1 dTDP-glucose 4,6-dehydratase -
  EB817_RS05540 (EB817_05545) - 1067829..1068422 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  EB817_RS05545 (EB817_05550) rfbA 1068422..1069291 (-) 870 WP_014407521.1 glucose-1-phosphate thymidylyltransferase RfbA -
  EB817_RS05550 (EB817_05555) - 1069349..1070455 (-) 1107 WP_129304778.1 FAD-dependent oxidoreductase -
  EB817_RS05555 (EB817_05560) - 1070495..1071283 (-) 789 WP_011888954.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18430.62 Da        Isoelectric Point: 4.3268

>NTDB_id=283095 EB817_RS05530 WP_115225072.1 1065848..1066324(-) (mutX) [Streptococcus pyogenes strain TSPY165]
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLVDKSVTFY

Nucleotide


Download         Length: 477 bp        

>NTDB_id=283095 EB817_RS05530 WP_115225072.1 1065848..1066324(-) (mutX) [Streptococcus pyogenes strain TSPY165]
ATGACTCAATTAGCAACCATTTGTTACATTGATAATGGCGATTCTTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACAAAGGCAAGTGGATTTCAGTTGGGGGTAAGCTCGAGGCTGGTGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTTTAGAGGAAACCCATTTGACTGTTACAGAGATGGCCTTTAAAGGAATCATTACTTTTCCAGAATTTACCCCTGGTCAT
GACTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAAGAGTCACGAGAAGGAACCTT
GGAATGGGTACCTTACGATCAAGTGTTGGAAAAGCCAACTTGGGAAGGTGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACCTATGACCAAAACAACCAACTCGTGGATAAATCTGTGACCTTTTATTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

70.253

100

0.703

Multiple sequence alignment